RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 OR56B1Q8NGI3 324 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 HUS1BQ8NHY5 278 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 PRRT1Q99946 306 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 PCDHGA5Q9Y5G8 931 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 PIRO00625 290 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 MAFKO60675 156 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 BPNT1O95861 308 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 IFNA5P01569 189 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RAB6AP20340 208 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 AKR1C2P52895 323 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 OR4D2P58180 307 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 UBE2IP63279 158 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 PSPHP78330 225 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 AKR1C1Q04828 323 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 ODF4Q2M2E3 257 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 ZNF805Q5CZA5 627 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 FAM182AQ5T1J6 154 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 ZNF585AQ6P3V2 769 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 NOL4LQ96MY1 436 aaPredicted RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 SLC2A9Q9NRM0 540 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RBBP6Q7Z6E9 1792 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 FAM230AA0A1W2PPH8 454 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 SEC14L6B5MCN3 397 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RNASET2O00584 256 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 BDKRB2P30411 391 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 SNCAP37840 140 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 UPP1Q16831 310 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 C1orf220Q5T0J3 134 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 NPWQ8N729 165 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 OR14A16Q8NHC5 309 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RSPRY1Q96DX4 576 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 ESRP2Q9H6T0 727 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 SEC61A2Q9H9S3 476 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 EPHA6Q9UF33 1036 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 POMT2Q9UKY4 750 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 GPX3P22352 226 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 PTPRDP23468 1912 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RAB1AP62820 205 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 SLC35G1Q2M3R5 365 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 C18orf63Q68DL7 685 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 CELF5Q8N6W0 485 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 BVESQ8NE79 360 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 ACSS1Q9NUB1 689 aaPredicted RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 MRPL15Q9P015 296 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 GIMAP2Q9UG22 337 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 A0A0D9SEW6 157 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 A0A0G2JN53 185 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 TCRBP04435 133 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RNF224P0DH78 156 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 RABGGTBP53611 331 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 H3F3AP84243 136 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 C6orf120Q7Z4R8 191 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 BMFQ96LC9 184 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 WWTR1Q9GZV5 400 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 PCDHGA9Q9Y5G4 932 aaKnown RBP5.36□□□□□ -1.55
VCAN-201ENST00000265077 PUS1Q9Y606 427 aaKnown RBP eCLIP5.36□□□□□ -1.55
VCAN-201ENST00000265077 ENPP4Q9Y6X5 453 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 KMT2EQ8IZD2 1858 aa5.36□□□□□ -1.55
VCAN-201ENST00000265077 VEGFDO43915 354 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ALDOCP09972 364 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 ADRB3P13945 408 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 AMY2BP19961 511 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 POU3F3P20264 500 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 CRABP1P29762 137 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 CDK3Q00526 305 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ELAVL3Q14576 367 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 SGCAQ16586 387 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 LIPNQ5VXI9 398 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 GPR155Q7Z3F1 870 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 WDTC1Q8N5D0 677 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR2G2Q8NGZ5 317 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 FAM46BQ96A09 425 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 MS4A7Q9GZW8 240 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 ASB6Q9NWX5 421 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 YIPF1Q9Y548 306 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ARNTLO00327 626 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 HOXB9P17482 250 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 CNR1P21554 472 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 HSD11B2P80365 405 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 PLA2G7Q13093 441 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SUSD1Q6UWL2 747 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 RDH10Q8IZV5 341 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 KDM8Q8N371 416 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR4E2Q8NGC2 313 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 HPSE2Q8WWQ2 592 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 TMEM121BQ9BXQ6 578 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 LRFN1Q9P244 771 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 C17orf113A0A1B0GUU1 675 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SLC16A6O15403 523 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OLFM2O95897 454 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 SLURP2P0DP57 97 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 PSMB1P20618 241 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 CNR2P34972 360 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ADARB1P78563 741 aaKnown RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 SORDQ00796 357 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 OR13C3Q8NGS6 347 aa5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZNF300Q96RE9 604 aaPredicted RBP5.35□□□□□ -1.55
VCAN-201ENST00000265077 ZNF587Q96SQ5 575 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms