RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 VTCN1Q7Z7D3 282 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 ZNF440Q8IYI8 595 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 BHLHE22Q8NFJ8 381 aaPredicted RBP16.53■□□□□ 0.24
SDF4-201ENST00000263741 ST8SIA1Q92185 356 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 MRGPRX4Q96LA9 322 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 ACER3Q9NUN7 267 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 SH3GLB1Q9Y371 365 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 DENRO43583 198 aaKnown RBP16.52■□□□□ 0.24
SDF4-201ENST00000263741 LGI1O95970 557 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 ZNF708P17019 499 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 CA7P43166 264 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 OR1E2P47887 323 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 GLYR1Q49A26 553 aaPredicted RBP16.52■□□□□ 0.24
SDF4-201ENST00000263741 GLYATQ6IB77 296 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 ENPP6Q6UWR7 440 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 GGNQ86UU5 652 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 OR6T1Q8NGN1 323 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 TMEM234Q8WY98 164 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 ARHGDIGQ99819 225 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 PRDM14Q9GZV8 571 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 KLHL28Q9NXS3 571 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 COMMD3-BMI1R4GMX3 469 aa16.52■□□□□ 0.24
SDF4-201ENST00000263741 STSP08842 583 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 PTNP21246 168 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 TACR3P29371 465 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 GSTT1P30711 240 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 EIF1P41567 113 aaKnown RBP16.52■□□□□ 0.23
SDF4-201ENST00000263741 NRF1Q16656 503 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 CNPY1Q3B7I2 92 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 SLC25A53Q5H9E4 307 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 LILRA2Q8N149 483 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 FAM86B1Q8N7N1 296 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 LRRK2Q5S007 2527 aa16.52■□□□□ 0.23
SDF4-201ENST00000263741 COL12A1Q99715 3063 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 NCOA6Q14686 2063 aaPredicted RBP16.51■□□□□ 0.23
SDF4-201ENST00000263741 INTS1Q8N201 2190 aaKnown RBP16.51■□□□□ 0.23
SDF4-201ENST00000263741 ARPC2O15144 300 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 LRRTM2O43300 516 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 RTL6Q6ICC9 239 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 GRINAQ7Z429 371 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 TSPYL5Q86VY4 417 aaPredicted RBP16.51■□□□□ 0.23
SDF4-201ENST00000263741 PROX1Q92786 737 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 TUBA1CQ9BQE3 449 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 FAM215AQ9Y5M1 114 aa16.51■□□□□ 0.23
SDF4-201ENST00000263741 ETV2O00321 342 aaPredicted RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 SYT5O00445 386 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 EIF1AYO14602 144 aaKnown RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 SEMA7AO75326 666 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 COPZ1P61923 177 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 ZSWIM7Q19AV6 140 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 UGT2A3Q6UWM9 527 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 RPTNQ6XPR3 784 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 CARM1Q86X55 608 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 TNIP2Q8NFZ5 429 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 OR52E4Q8NGH9 312 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 ZNF845Q96IR2 970 aaPredicted RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 OR11A1Q9GZK7 315 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 RIMS3Q9UJD0 308 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 OSGIN1Q9UJX0 560 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 CCL21O00585 134 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 TNFSF11O14788 317 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 STAMBPO95630 424 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 ATP6V1B2P21281 511 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 ACVR2AP27037 513 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 SLC1A3P43003 542 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 BNIP2Q12982 314 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 SELENBP1Q13228 472 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 FXNQ16595 210 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 CTU2Q2VPK5 515 aaKnown RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 ACSF3Q4G176 576 aaPredicted RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 CYP2R1Q6VVX0 501 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 SPATA24Q86W54 205 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 ASB9Q96DX5 294 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 TP63Q9H3D4 680 aaPredicted RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 TESQ9UGI8 421 aaKnown RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 ERRFI1Q9UJM3 462 aaPredicted RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 SNX13Q9Y5W8 968 aa16.5■□□□□ 0.23
SDF4-201ENST00000263741 SPTBN1Q01082 2364 aaKnown RBP16.5■□□□□ 0.23
SDF4-201ENST00000263741 TMED7-TICAM2A0A0A6YYA0 188 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 A0A1B0GWA3 101 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 A0A1W2PNR3 127 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 FIGNL2A6NMB9 653 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 CPSF4LA6NMK7 179 aaKnown RBP16.49■□□□□ 0.23
SDF4-201ENST00000263741 FAAHO00519 579 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 TNFAIP8O95379 198 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 IFNA14P01570 189 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 ELK4P28324 431 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 ADH6P28332 368 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 CASP6P55212 293 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 C11orf91Q3C1V1 193 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 WBP2NLQ6ICG8 309 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 PPP4R4Q6NUP7 873 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 DEF8Q6ZN54 512 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 ADGRG3Q86Y34 549 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 RASSF5Q8WWW0 418 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 C3orf49Q96BT1 292 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 HSH2DQ96JZ2 352 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 TRIB1Q96RU8 372 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 MCHR1Q99705 422 aa16.49■□□□□ 0.23
SDF4-201ENST00000263741 ADPRHL2Q9NX46 363 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms