RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PHF7Q9BWX1 381 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 AUNIPQ9H7T9 357 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 THAP10Q9P2Z0 257 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 TBC1D29Q9UFV1 150 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 GXYLT2A0PJZ3 443 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 H0Y8X5 98 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ATF1P18846 271 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 SRSF5Q13243 272 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 RUNX2Q13950 521 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 DCST2Q5T1A1 773 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ZAR1Q86SH2 424 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ASPGQ86U10 573 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 THAP4Q8WY91 577 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 RAB7BQ96AH8 199 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 OR14A2Q96R54 314 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 PIGUQ9H490 435 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 FGF22Q9HCT0 170 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 OR6C2Q9NZP2 312 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 PPIEQ9UNP9 301 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 A0A1B0GVT2 93 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 STX11O75558 287 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 SOX30O94993 753 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 NPR2P20594 1047 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 DNASE1P24855 282 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ACTR1BP42025 376 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ACTR1AP61163 376 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 PYHIN1Q6K0P9 492 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ENPP7Q6UWV6 458 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 TMEM27Q9HBJ8 222 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
SFSWAP-201ENST00000261674 DCNP07585 359 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 KIR2DL1P43626 348 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF542PQ5EBM4 170 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF680Q8NEM1 530 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 OR2T35Q8NGX2 323 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 DERL3Q96Q80 235 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 TEX101Q9BY14 249 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 OR10A4Q9H209 315 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 IL21RQ9HBE5 538 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 KCNE5Q9UJ90 142 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 BHLHE40O14503 412 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 IMPA2O14732 288 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 RPP14O95059 124 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 HRGP04196 525 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ANKRD34CP0C6C1 535 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF3P17036 446 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 THBS2P35442 1172 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF267Q14586 743 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ZNF764Q96H86 408 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 CLEC4MQ9H2X3 399 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 ANKRD19PQ9H560 264 aa13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
SFSWAP-201ENST00000261674 POM121BA6NF01 834 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 LEUTXA8MZ59 168 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 P2RX6O15547 441 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 FLRT2O43155 660 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 KLF4O43474 513 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 PRKNO60260 465 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 EDNRAP25101 427 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ANGPT1Q15389 498 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 EIPR1Q53HC9 387 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ESCO2Q56NI9 601 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ZBTB37Q5TC79 503 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SIGIRRQ6IA17 410 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 FAAP20Q6NZ36 180 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SLC38A6Q8IZM9 456 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 MFSD9Q8NBP5 474 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 NR4A3Q92570 626 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 MSANTD3Q96H12 275 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 MEPEQ9NQ76 525 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 CMC2Q9NRP2 79 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 PHF11Q9UIL8 331 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ADAM18Q9Y3Q7 739 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ACOD1A6NK06 481 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 IDSB3KWA1 339 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 B3GALT2O43825 422 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 ADRB1P08588 477 aa13.35□□□□□ -0.27
SFSWAP-201ENST00000261674 NTSR1P30989 418 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms