RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ZNF793Q6ZN11 406 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HTR3DQ70Z44 454 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 NPRL2Q8WTW4 380 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 LYARQ9NX58 379 aaKnown RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 BACE2Q9Y5Z0 518 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 U3KQ87 197 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 TRDV1A0A1B0GX56 115 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 LEUTXA8MZ59 168 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 KCNAB3O43448 404 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 CDC40O60508 579 aaKnown RBP eCLIP9.38□□□□□ -0.91
PALB2-201ENST00000261584 RAF1P04049 648 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 AMY2AP04746 511 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 MAP2K6P52564 334 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 CSNK1G2P78368 415 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HLA-DQA1Q5Y7H0 255 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HBMQ6B0K9 141 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ADIPOR2Q86V24 386 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 NRROSQ86YC3 692 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 LAS2Q8IYD9 372 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 BEST3Q8N1M1 668 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 OR51D1Q8NGF3 324 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ST8SIA4Q92187 359 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 TEAD3Q99594 435 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 LIN7BQ9HAP6 207 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 IL21Q9HBE4 155 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 A0A0G2JPF8 293 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 TRAPPC13A5PLN9 417 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HNRNPCL3B7ZW38 293 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 SCO2O43819 266 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 RDH16O75452 317 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ITGA10O75578 1167 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ARHGEF15O94989 841 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HNRNPCL4P0DMR1 293 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 PCSK2P16519 638 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 MMP12P39900 470 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 GUCA2AQ02747 115 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 DUSP2Q05923 314 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 EIF2B1Q14232 305 aaKnown RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 ZBTB37Q5TC79 503 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 GID4Q8IVV7 300 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 OR5M1Q8NGP8 315 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 WNT2BQ93097 391 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 SLC35A4Q96G79 324 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 C5orf34Q96MH7 638 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ACTRT3Q9BYD9 372 aa9.38□□□□□ -0.91
PALB2-201ENST00000261584 ZNF768Q9H5H4 540 aaKnown RBP9.38□□□□□ -0.91
PALB2-201ENST00000261584 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
PALB2-201ENST00000261584 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 B8ZZF3 427 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 TNFSF12O43508 249 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 ATF1P18846 271 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 SLC6A6P31641 620 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 AGFG1P52594 562 aaKnown RBP9.37□□□□□ -0.91
PALB2-201ENST00000261584 PER3P56645 1201 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 CLDN20P56880 219 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 TCEAL8Q8IYN2 117 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 MS4A15Q8N5U1 240 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 RFLNBQ8N5W9 214 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 OR7G2Q8NG99 324 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 CAPNS2Q96L46 248 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.37□□□□□ -0.91
PALB2-201ENST00000261584 ZNF350Q9GZX5 532 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 DIABLOQ9NR28 239 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 HRASLS2Q9NWW9 162 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 NPAP1Q9NZP6 1156 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 FITM1A5D6W6 292 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 GPR171O14626 319 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 LGI1O95970 557 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 GLI4P10075 376 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
PALB2-201ENST00000261584 BSGP35613 385 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 CDK3Q00526 305 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 CDNFQ49AH0 187 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 B3GNTL1Q67FW5 361 aaPredicted RBP9.37□□□□□ -0.91
PALB2-201ENST00000261584 LINC00299Q6ZSB3 139 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 SGTBQ96EQ0 304 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 MS4A3Q96HJ5 214 aa9.37□□□□□ -0.91
PALB2-201ENST00000261584 RAD9AQ99638 391 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms