RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TFP02787 698 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 HRGP04196 525 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 RABIFP47224 123 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 DGCR2P98153 550 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ST3GAL3Q11203 375 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ILF3Q12906 894 aaKnown RBP eCLIP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC30A6Q6NXT4 461 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SZRD1Q7Z422 152 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 PM20D2Q8IYS1 436 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 OR6V1Q8N148 313 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 BMPERQ8N8U9 685 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 AMER3Q8N944 861 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF527Q8NB42 609 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 KCT2Q8NC54 265 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 BVESQ8NE79 360 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 BEST4Q8NFU0 473 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 OR4E2Q8NGC2 313 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 OR5W2Q8NH69 310 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 XAGE5Q8WWM1 108 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 MARC2Q969Z3 335 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 BMFQ96LC9 184 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SERINC2Q96SA4 455 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ALG8Q9BVK2 526 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 FN3KQ9H479 309 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ISG20L2Q9H9L3 353 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 PCDHB16Q9NRJ7 776 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 POT1Q9NUX5 634 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CLDND1Q9NY35 253 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 FBXL3Q9UKT7 428 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CES1P1Q9UKY3 287 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ATG4BQ9Y4P1 393 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SIRT4Q9Y6E7 314 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 PLXND1Q9Y4D7 1925 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A0G2JN53 185 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 GSAPA4D1B5 854 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 A6NCN8 305 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ABCD4O14678 606 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF749O43361 778 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 RASGRP1O95267 797 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 LDOC1O95751 146 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ECDO95905 644 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ANKRD34CP0C6C1 535 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 TYRP1P17643 537 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 NDUFV2P19404 249 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CXCL2P19875 107 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 NFYAP23511 347 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 TLX1P31314 330 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CLDN2P57739 230 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 TAS2R41P59536 307 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 MAPK14Q16539 360 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 DECR1Q16698 335 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 MANEAQ5SRI9 462 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CXXC5Q7LFL8 322 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CEACAM19Q7Z692 300 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC44A3Q8N4M1 653 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 EID2Q8N6I1 236 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CAMKVQ8NCB2 501 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ABHD4Q8TB40 342 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SMIM4Q8WVI0 70 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 RSC1A1Q92681 617 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 DDOQ99489 341 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ARHGDIGQ99819 225 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF416Q9BWM5 594 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC7A5P2Q9GIP4 190 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 APOBEC3BQ9UH17 382 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 MMP17Q9ULZ9 603 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SPATA2Q9UM82 520 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 DOCK9Q9BZ29 2069 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A1B0GTQ1 180 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A1B0GVC2 190 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 A6NIN4 97 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 MCRIP1C9JLW8 97 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 KLF4O43474 513 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 STX11O75558 287 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 OR2A4O95047 310 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 TNFP01375 233 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 MT-ND4P03905 459 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 MT-ND5P03915 603 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 WNT1P04628 370 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 ALDOBP05062 364 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 IFI6P09912 130 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 HOXB3P14651 431 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 IFNGR1P15260 489 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 GNSP15586 552 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 RAB3BP20337 219 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 PSMB1P20618 241 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 PAICSP22234 425 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CERS1P27544 350 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CCR5P51681 352 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CCR9P51686 369 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 OR10A3P58181 314 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 BTN3A2P78410 334 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF169Q14929 603 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 ZSWIM7Q19AV6 140 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CLEC12AQ5QGZ9 265 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms