RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZNF117Q03924 483 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 PRKCDQ05655 676 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 BTBD16Q32M84 506 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 ULK3Q6PHR2 472 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 LYPD8Q6UX82 237 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 HGDQ93099 445 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 ZNF524Q96C55 264 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 LAT2Q9GZY6 243 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 MEPEQ9NQ76 525 aaPredicted RBP15.91■□□□□ 0.14
SRSF1-201ENST00000258962 SCN3BQ9NY72 215 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 MYOTQ9UBF9 498 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 TPRKBQ9Y3C4 175 aa15.91■□□□□ 0.14
SRSF1-201ENST00000258962 KPNA4O00629 521 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-201ENST00000258962 CDC42EP2O14613 210 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 EEF1B2P24534 225 aaKnown RBP15.9■□□□□ 0.14
SRSF1-201ENST00000258962 MST1P26927 711 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 RBM34P42696 430 aaKnown RBP15.9■□□□□ 0.14
SRSF1-201ENST00000258962 CDC42P60953 191 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 CDK5Q00535 292 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 EFR3AQ14156 821 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 FOXB2Q5VYV0 432 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 SATL1Q86VE3 508 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 IQCF1Q8N6M8 205 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 TMCO5AQ8N6Q1 288 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 C3orf49Q96BT1 292 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 THOC3Q96J01 351 aaKnown RBP15.9■□□□□ 0.14
SRSF1-201ENST00000258962 MPP4Q96JB8 637 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 HS6ST2Q96MM7 605 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 NODALQ96S42 347 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 TBL1XR1Q9BZK7 514 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 LHPPQ9H008 270 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 IMPAD1Q9NX62 359 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 RPS6KB2Q9UBS0 482 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 CPAMD8Q8IZJ3 1885 aa15.9■□□□□ 0.14
SRSF1-201ENST00000258962 B8ZZF3 427 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 K7EM74 188 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 NDUFB5O43674 189 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 SCO2O43819 266 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 MRPS14O60783 128 aaKnown RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 C1QL1O75973 258 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 IFI30P13284 250 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 FUT1P19526 365 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 ALDH3B2P48448 385 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 CCR4P51679 360 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 CTBP2P56545 445 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 TEKQ02763 1124 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 GINS1Q14691 196 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 EXT1Q16394 746 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 NADK2Q4G0N4 442 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 PLAG1Q6DJT9 500 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 ZNF620Q6ZNG0 422 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 TEX19Q8NA77 164 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 OR5M3Q8NGP4 307 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 RNF138Q8WVD3 245 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 SH3YL1Q96HL8 342 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 RHNO1Q9BSD3 238 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 DEFB126Q9BYW3 111 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 CXorf56Q9H5V9 222 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 SLC25A19Q9HC21 320 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 MMP25Q9NPA2 562 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 KRCC1Q9NPI7 259 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 MED31Q9Y3C7 131 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 MPDZO75970 2070 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 A0A087WUJ7 227 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 HCRTR2O43614 444 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 EIF4E2O60573 245 aaKnown RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 OR2J2O76002 312 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 NAGAP17050 411 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 GIPRP48546 466 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 COPZ1P61923 177 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 PIGFQ07326 219 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 AGAP7PQ5VUJ5 663 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 WBP2NLQ6ICG8 309 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 ACSM5Q6NUN0 579 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 TMPRSS11FQ6ZWK6 438 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 M1APQ8TC57 530 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 DNAJA4Q8WW22 397 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 TM9SF4Q92544 642 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 BPIFA2Q96DR5 249 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 AGAP4Q96P64 663 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 SMAD5Q99717 465 aaKnown RBP15.89■□□□□ 0.13
SRSF1-201ENST00000258962 ICAM5Q9UMF0 924 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 TMEM5Q9Y2B1 443 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 SNX5Q9Y5X3 404 aa15.89■□□□□ 0.13
SRSF1-201ENST00000258962 UNC119BA6NIH7 251 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 MPZL2O60487 215 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 FAM20BO75063 409 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 SERPINA7P05543 415 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 SLC6A8P48029 635 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 SLC35A2P78381 396 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 KLRB1Q12918 225 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 PTCHD4Q6ZW05 846 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 ATG4DQ86TL0 474 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-201ENST00000258962 P3H2Q8IVL5 708 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 CLDN22Q8N7P3 220 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 TEX47Q8TBZ9 253 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 TUBA1CQ9BQE3 449 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 DUSP21Q9H596 190 aa15.88■□□□□ 0.13
SRSF1-201ENST00000258962 ZNF552Q9H707 407 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms