RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 SYT9Q86SS6 491 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 MARCH9Q86YJ5 346 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 CDK20Q8IZL9 346 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 LNX2Q8N448 690 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 BRIX1Q8TDN6 353 aaKnown RBP12.04□□□□□ -0.48
THSD1-201ENST00000258613 RFKQ969G6 155 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ADOQ96SZ5 270 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 B3GNT4Q9C0J1 378 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 POU2F3Q9UKI9 436 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 V9GYH0 126 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 TLCD2A6NGC4 264 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 SNTNA6NMZ2 147 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 CHP2O43745 196 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 HIST1H1CP16403 213 aaKnown RBP12.04□□□□□ -0.48
THSD1-201ENST00000258613 OR12D2P58182 307 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 HNRNPKP61978 463 aaKnown RBP eCLIP12.04□□□□□ -0.48
THSD1-201ENST00000258613 TPBGQ13641 420 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ARL9Q6T311 187 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ZNF322Q6U7Q0 402 aaPredicted RBP12.04□□□□□ -0.48
THSD1-201ENST00000258613 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
THSD1-201ENST00000258613 NR2C2APQ86WQ0 139 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 C17orf47Q8NEP4 570 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ATP6V1C2Q8NEY4 427 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 PHOSPHO1Q8TCT1 267 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 SLC25A46Q96AG3 418 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 KCTD7Q96MP8 289 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 ALG8Q9BVK2 526 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 LANCL2Q9NS86 450 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 IER3IP1Q9Y5U9 82 aa12.04□□□□□ -0.48
THSD1-201ENST00000258613 URB1O60287 2271 aaKnown RBP12.04□□□□□ -0.48
THSD1-201ENST00000258613 A0A087WV48 116 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 SLC30A4O14863 429 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 CASKO14936 926 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 KHNYNO15037 678 aaKnown RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 ZNF749O43361 778 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 PRAMEF2O60811 474 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 HMGN1P05114 100 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 ARL4DP49703 201 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 FAM69BQ5VUD6 431 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TMPRSS11FQ6ZWK6 438 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 NR4A3Q92570 626 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TSSK2Q96PF2 358 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 DAPL1A0PJW8 107 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 NPIPB9F8W1W9 429 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 J3QLW9 94 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TAF4O00268 1085 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 GABRPO00591 440 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TMCC2O75069 709 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ZNF19P17023 458 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ATP12AP54707 1039 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ZNF45Q02386 682 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 DSG2Q14126 1118 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 FGFBP1Q14512 234 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 IL20RBQ6UXL0 311 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TMPRSS11AQ6ZMR5 421 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 TMEM91Q6ZNR0 172 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 LINC00299Q6ZSB3 139 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 LANCL3Q6ZV70 420 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 KLHL36Q8N4N3 616 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 FAM98AQ8NCA5 519 aaKnown RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 OR6C4Q8NGE1 309 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 OR4C6Q8NH72 309 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 RASD2Q96D21 266 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ORAI1Q96D31 301 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 DIRAS2Q96HU8 199 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 NMNAT3Q96T66 252 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 RPS6KB2Q9UBS0 482 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 IGHV1OR21-1A0A087WYE8 117 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 SERINC4A6NH21 518 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 BLOC1S5-TXNDC5H3BN57 136 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 RPL4P36578 427 aaKnown RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 ERVK-25P63136 954 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 PSPHP78330 225 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 FUT7Q11130 342 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ZNF613Q6PF04 617 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 CCBE1Q6UXH8 406 aaPredicted RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 QSOX2Q6ZRP7 698 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 ACBD7Q8N6N7 88 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 CLDN22Q8N7P3 220 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 MOSPD2Q8NHP6 518 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 SUN5Q8TC36 379 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 THAP3Q8WTV1 239 aaPredicted RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 DEPDC7Q96QD5 511 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 CMC2Q9NRP2 79 aa12.03□□□□□ -0.48
THSD1-201ENST00000258613 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
THSD1-201ENST00000258613 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
THSD1-201ENST00000258613 LILRA5A6NI73 299 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms