RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CLIP4Q8N3C7 705 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 GDPD1Q8N9F7 314 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR9A2Q8NGT5 310 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR52N1Q8NH53 320 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR52P1PQ8NH57 321 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 POC1BQ8TC44 478 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ADAMTS15Q8TE58 950 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZFPM2Q8WW38 1151 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 LCN9Q8WX39 176 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RNF31Q96EP0 1072 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RNFT2Q96EX2 444 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 C16orf58Q96GQ5 468 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SMIM10Q96HG1 83 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 KCTD7Q96MP8 289 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 WWC2-AS2Q96NR7 200 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SERINC2Q96SA4 455 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 KCNS3Q9BQ31 491 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SPHK1Q9NYA1 384 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 NLGN3Q9NZ94 848 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PTGFRNQ9P2B2 879 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 GSTK1Q9Y2Q3 226 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CMAHPQ9Y471 501 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 V9GYH0 126 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TRDV1A0A1B0GX56 115 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 A0A1W2PPC4 97 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ANTXRLA6NF34 631 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 AQP7P3A6NL99 342 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 WASHC1A8K0Z3 465 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SOX30O94993 753 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 AK1P00568 194 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CA3P07451 260 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TRAPPC2P0DI81 140 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TRAPPC2BP0DI82 140 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 MYOGP15173 224 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CFL1P23528 166 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PTBP1P26599 531 aaKnown RBP eCLIP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 NTSR1P30989 418 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TLX1P31314 330 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CASP3P42574 277 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 MAGEA10P43363 369 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TPTEP56180 551 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RGS8P57771 180 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RAB8AP61006 207 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 BTN3A2P78410 334 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 BDH1Q02338 343 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CD300CQ08708 224 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 FOXD4Q12950 439 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ARHGAP11BQ3KRB8 267 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ARMC4Q5T2S8 1044 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 AGAP6Q5VW22 663 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 LIPKQ5VXJ0 399 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF544Q6NX49 715 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZCCHC12Q6PEW1 402 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 XKRXQ6PP77 449 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 FRRS1Q6ZNA5 592 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF620Q6ZNG0 422 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PLEKHM3Q6ZWE6 761 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 C1orf210Q8IVY1 113 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RNF113BQ8IZP6 322 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR2L13Q8N349 312 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF485Q8NCK3 441 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR8D4Q8NGM9 314 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 GANCQ8TET4 914 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 RSC1A1Q92681 617 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TM4SF19Q96DZ7 209 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 TRMT61AQ96FX7 289 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ABHD8Q96I13 439 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 AGAP4Q96P64 663 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 OR2A14Q96R47 310 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PLA2G12AQ9BZM1 189 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 PLA2G2FQ9BZM2 168 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SRRQ9GZT4 340 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 FN3KQ9H479 309 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 FGF22Q9HCT0 170 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 LYRM4Q9HD34 91 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZDHHC4Q9NPG8 344 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SNTG1Q9NSN8 517 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SEMA4GQ9NTN9 838 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ASB6Q9NWX5 421 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SATB2Q9UPW6 733 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF443Q9Y2A4 671 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 EXOGQ9Y2C4 368 aaKnown RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 SPIN1Q9Y657 262 aaPredicted RBP7.25□□□□□ -1.25
CXCR4-201ENST00000241393 KCNE3Q9Y6H6 103 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 CDH10Q9Y6N8 788 aa7.25□□□□□ -1.25
CXCR4-201ENST00000241393 A0A087WV62 115 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 H3BQ06 376 aaPredicted RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 K7EQS6 105 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 SURF4O15260 269 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 RGS5O15539 181 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 LATO43561 262 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 AKAP8O43823 692 aaKnown RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 FMO6PO60774 539 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CDRT1O95170 752 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 APBB3O95704 486 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 LIMS3P0CW19 117 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 LIMS4P0CW20 117 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms