RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 SPRYD4Q8WW59 207 aaPredicted RBP12.1□□□□□ -0.47
PLOD3-201ENST00000223127 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
PLOD3-201ENST00000223127 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
PLOD3-201ENST00000223127 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
PLOD3-201ENST00000223127 CBLCQ9ULV8 474 aa12.1□□□□□ -0.47
PLOD3-201ENST00000223127 A0A0A6YYC8 382 aaPredicted RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 I3L1I5 382 aaPredicted RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 EPPINO95925 133 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 IFNA7P01567 189 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 CDH11P55287 796 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 NXPH1P58417 271 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 HNRNPKP61978 463 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■■□ 21.8
PLOD3-201ENST00000223127 HSF2Q03933 536 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 PRSS42Q7Z5A4 293 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 GPAT4Q86UL3 456 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 TOR1AIP2Q8NFQ8 470 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 FAM174AQ8TBP5 190 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 SFXN5Q8TD22 340 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 ACOT12Q8WYK0 555 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 AIFM2Q9BRQ8 373 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 ADAP2Q9NPF8 381 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 TEX13CA0A0J9YWL9 993 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 CPMP14384 443 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 NT5EP21589 574 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 AHCYP23526 432 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 RBMS1P29558 406 aaKnown RBP12.09□□□□□ -0.47
PLOD3-201ENST00000223127 THBS2P35442 1172 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 CAPZBP47756 277 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 FASLGP48023 281 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 MAP4K2Q12851 820 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 CEBPEQ15744 281 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 SLC27A4Q6P1M0 643 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 RTL4Q6ZR62 310 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 KRT74Q7RTS7 529 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 C16orf62Q7Z3J2 963 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 ADAMTS15Q8TE58 950 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 OR2M2Q96R28 347 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 DPAGT1Q9H3H5 408 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 ASB6Q9NWX5 421 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 SOHLH2Q9NX45 425 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 HCN3Q9P1Z3 774 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
PLOD3-201ENST00000223127 WDFY4Q6ZS81 3184 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 DMDP11532 3685 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 OR2W5A6NFC9 320 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CASC3O15234 703 aaKnown RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 FRS3O43559 492 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 FCMRO60667 390 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 HOXD4P09016 255 aaPredicted RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CRYZQ08257 329 aaKnown RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 HBMQ6B0K9 141 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 KLHL36Q8N4N3 616 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 WBP1Q96G27 269 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CLEC4MQ9H2X3 399 aaPredicted RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 ASXL3Q9C0F0 2248 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 G3V3Q6 166 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 TCRBP04435 133 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 ANXA11P50995 505 aaKnown RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
PLOD3-201ENST00000223127 PUDPQ08623 228 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 ACSM1Q08AH1 577 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CAMK2DQ13557 499 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 LYPD4Q6UWN0 246 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 KLBQ86Z14 1044 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 GJD3Q8N144 294 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CA13Q8N1Q1 262 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 OR6T1Q8NGN1 323 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 CDS1Q92903 461 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 MOAP1Q96BY2 351 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 GIMAP5Q96F15 307 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 DLL4Q9NR61 685 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 FRYLO94915 3013 aa12.08□□□□□ -0.48
PLOD3-201ENST00000223127 MEIKINA0A087WXM9 373 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 A0A1B0GVT2 93 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 LMO7DNF2Z398 122 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 K7ESF4 209 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 CYR61O00622 381 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 TSPAN4O14817 238 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 BCAT2O15382 392 aaPredicted RBP12.07□□□□□ -0.48
PLOD3-201ENST00000223127 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
PLOD3-201ENST00000223127 NTN1O95631 604 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 RNF144AP50876 292 aaPredicted RBP12.07□□□□□ -0.48
PLOD3-201ENST00000223127 ERV3-1Q14264 604 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 AMZ1Q400G9 498 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 SLC36A2Q495M3 483 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 CLEC12AQ5QGZ9 265 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 VRK2Q86Y07 508 aa12.07□□□□□ -0.48
PLOD3-201ENST00000223127 SAMD12Q8N8I0 201 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms