RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTNS-201ENST00000046640 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 RBM18Q96H35 190 aaKnown RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 ZFP3Q96NJ6 502 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 MAP3K3Q99759 626 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 THAP7Q9BT49 309 aaPredicted RBP12.12□□□□□ -0.47
CTNS-201ENST00000046640 NUDT15Q9NV35 164 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 RASD1Q9Y272 281 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 PCDHGB7Q9Y5F8 929 aa12.12□□□□□ -0.47
CTNS-201ENST00000046640 SPTY2D1-AS1A0A0U1RR47 76 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 OR5K3A6NET4 321 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 PPP1R3DO95685 299 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 PSG6Q00889 435 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 BMPERQ8N8U9 685 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 TNFRSF13CQ96RJ3 184 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 ANKRD19PQ9H560 264 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 TP53BP1Q12888 1972 aaPredicted RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 SHISA7A6NL88 538 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 CD3GP09693 182 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 HTR1FP30939 366 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 CCINQ13939 588 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 ZNF322Q6U7Q0 402 aaPredicted RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 DUSP18Q8NEJ0 188 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 PTP4A1Q93096 173 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 MED28Q9H204 178 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 DUSP22Q9NRW4 184 aa12.11□□□□□ -0.47
CTNS-201ENST00000046640 MRPS18AQ9NVS2 196 aaKnown RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 ZNF223Q9UK11 482 aaPredicted RBP12.11□□□□□ -0.47
CTNS-201ENST00000046640 SEC14L5O43304 696 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 RNF13O43567 381 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 BRINP1O60477 761 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 NGFRP08138 427 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 SSTR2P30874 369 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 FOXK2Q01167 660 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 IZUMO1Q8IYV9 350 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 CDK20Q8IZL9 346 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ARL14Q8N4G2 192 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 RIT1Q92963 219 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 LMF1Q96S06 567 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ZNF649Q9BS31 505 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 CCDC86Q9H6F5 360 aaKnown RBP12.1□□□□□ -0.47
CTNS-201ENST00000046640 NKIRAS2Q9NYR9 191 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 MED31Q9Y3C7 131 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ENTPD2Q9Y5L3 495 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 A0A1B0GWA3 101 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 DAPL1A0PJW8 107 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 J3QLW9 94 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 SDC3O75056 442 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 IFNA16P05015 189 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 HMGN1P05114 100 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 THBS1P07996 1170 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ZNF19P17023 458 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 BMP8BP34820 402 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 TALDO1P37837 337 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 E2F1Q01094 437 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 CRYZQ08257 329 aaKnown RBP12.1□□□□□ -0.47
CTNS-201ENST00000046640 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 RNF44Q7L0R7 432 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 BMP8AQ7Z5Y6 402 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 SOSTQ9BQB4 213 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 TMEM27Q9HBJ8 222 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 MGAT4AQ9UM21 535 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
CTNS-201ENST00000046640 ASXL3Q9C0F0 2248 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 BHLHE40O14503 412 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 TOXO94900 526 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 FZD5Q13467 585 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 CRMP1Q14194 572 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 KIAA0895LQ68EN5 471 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 CD200R1LQ6Q8B3 271 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 OAFQ86UD1 273 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 PLCZ1Q86YW0 608 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ABCA7Q8IZY2 2146 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ZNF431Q8TF32 576 aaPredicted RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 DNAJA4Q8WW22 397 aaPredicted RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 NR4A3Q92570 626 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 RFT1Q96AA3 541 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 KLHDC7BQ96G42 594 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 COQ7Q99807 217 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 LRRC61Q9BV99 259 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 KRCC1Q9NPI7 259 aaPredicted RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 LRIT1Q9P2V4 623 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 IRGMA1A4Y4 181 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms