RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Gm29797A0A140LIA7 188 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr64F8VPZ8 307 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Itfg2Q91WI7 443 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Sult5a1Q91X36 291 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Syt8Q9R0N6 395 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Nme4Q9WV84 186 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tmem185aA2AF53 350 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 PurbO35295 324 aaKnown RBP17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Snx3O70492 162 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gpat2Q14DK4 801 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 March5Q3KNM2 278 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Cdkl3Q8BLF2 595 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 AgmoQ8BS35 447 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Fam96bQ9D187 163 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Myo5bP21271 1818 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Bmp7P23359 430 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rack1P68040 317 aaKnown RBP17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Ranbp9P69566 653 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Mmp25Q3U435 615 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gls2Q571F8 602 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn1r33Q8R2E0 305 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr820Q8VFU5 312 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Siglec5Q920G3 569 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 AassQ99K67 926 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Myh13B1AR69 1938 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Zfp873A0A1B0GT64 667 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn2r107E9PZJ7 861 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn2r8L7N472 848 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Srsf5O35326 269 aaKnown RBP17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rhox4fQ2MDF8 205 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rhox4cQ2MDG1 205 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Zp1Q62005 623 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Slc2a12Q8BFW9 622 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rhox4aQ9D3I8 205 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Q9D4W2 315 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gab1Q9QYY0 695 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tnrc6cQ3UHC0 1690 aaKnown RBP17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn1r68E9Q0V3 319 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 SgcaP82350 387 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 OclnQ61146 521 aa17.31■□□□□ 0.36
Sort1-203ENSMUST00000135636 Btbd35f21A0A140T8Q5 498 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 NnmtO55239 264 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tktl1Q99MX0 595 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 SncgQ9Z0F7 123 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr1471F6QVZ8 314 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 GamtO35969 236 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gabrr1P56475 480 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rac2Q05144 192 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tas2r40Q7TQB8 319 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn1r30Q8R2D2 302 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Elp2Q91WG4 831 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 P2ry12Q9CPV9 347 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Fgf22Q9ESS2 162 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Trav10nA0A075B622 114 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Trav10A0A075B642 114 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Spin2gA0A0N4SW15 236 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Spin2eJ3QNQ0 234 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Prph2P15499 346 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Rab3aP63011 220 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 EogtQ8BYW9 527 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 MallQ91X49 154 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tmbim6Q9D2C7 237 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Sec14l1A8Y5H7 715 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gsg1lD3Z7H4 322 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 AcadsQ07417 412 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Prss38Q3UKY7 322 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Vmn1r23Q8R2D0 302 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Tspan10Q8VCF5 331 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Mrpl3Q99N95 348 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Nqo2Q9JI75 231 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Zfp69A2A761 587 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Zfp934K7N6H3 473 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 JPT1P97825 154 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 WdcpQ6NV72 663 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Ticam1Q80UF7 732 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 FarsaQ8C0C7 508 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Dnajc22Q8CHS2 339 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr849Q8VFF6 312 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Mcoln1Q99J21 580 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Cmtm3Q99LJ5 184 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Ssu72Q9CY97 194 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Dnajb1Q9QYJ3 340 aaKnown RBP17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 4930444P10RikD3YUR1 185 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr913E9Q716 312 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Zfand5O88878 213 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Cdh3P10287 822 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Klk1b11P15946 261 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gnao1P18872 354 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Csf2rbP26955 896 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Pcsk4P29121 655 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Spata6Q3U6K5 488 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Olfr146Q60884 306 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Fam221aQ8C790 301 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Akr7a2Q8CG76 367 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Gpr146Q99LE2 333 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 Oasl2Q9Z2F2 508 aa17.3■□□□□ 0.36
Sort1-203ENSMUST00000135636 MpgQ04841 333 aaKnown RBP17.29■□□□□ 0.36
Sort1-203ENSMUST00000135636 InipQ3TXT3 104 aa17.29■□□□□ 0.36
Sort1-203ENSMUST00000135636 Secisbp2Q3U1C4 858 aaKnown RBP17.29■□□□□ 0.36
Sort1-203ENSMUST00000135636 Q3UUX7 111 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms