RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Slc35a4Q9D321 324 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Znf207Q9JMD0 495 aaKnown RBP20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Mageh1Q9NWG9 218 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Med13Q5SWW4 2171 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Rhbdl2A2AGA4 302 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Spata6lB2RV46 347 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Zar1lC3VD30 291 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Inpp5aE9QAS7 422 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Lancl1O89112 399 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 P01735 133 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fabp3P11404 133 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cd79aP11911 220 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pcsk4P29121 655 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Elk4P41158 430 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fitm2P59266 262 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 RptnP97347 1118 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Kcnk9Q3LS21 402 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Grxcr2Q3TYR5 254 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pyroxd2Q3U4I7 581 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Il15raQ60819 263 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 BpiQ67E05 483 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Adgrd1Q80T32 903 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Lrrtm2Q8BGA3 515 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Q8BPC6 396 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cnot2Q8C5L3 540 aaKnown RBP20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Smco1Q8CEZ1 214 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cd177Q8R2S8 817 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Dkk4Q8VEJ3 221 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Elovl4Q9EQC4 312 aa20.87■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Vmn2r91E9Q2U5 856 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Kif1cO35071 1100 aaKnown RBP20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cops4O88544 406 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 SmsP97355 366 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Khdc4Q3TCX3 612 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ctsll3Q3ULP7 331 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cramp1Q6PG95 1285 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Oog2Q7TPX8 476 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Slc25a21Q8BZ09 298 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Tmem163Q8C996 288 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 FRRS1Q8K385 592 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Plet1Q8VEN2 237 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pno1Q9CPS7 248 aaKnown RBP20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Serpinb11Q9CQV3 388 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Gnpda2Q9CRC9 276 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 PtgesQ9JM51 153 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr71Q9QZ18 312 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Minpp1Q9Z2L6 481 aa20.86■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Igkv12-38A0A0G2JEI7 115 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr1375A0A0N4SUP0 313 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr1432A0A140LHS7 346 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Gm21820J3KMU2 361 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Gm6614M0QWR8 670 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Sh3yl1O08641 340 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Dppa5bP85965 119 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Prdx6bQ8BG37 224 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Clrn3Q8BHH8 226 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Tns4Q8BZ33 696 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 BpifcQ8C186 509 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Rhbdl1Q8VC82 373 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Acsm1Q91VA0 573 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Imp3Q921Y2 184 aaKnown RBP20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 SelenosQ9BCZ4 190 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 IqchQ9D2K4 1071 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 4933436I01RikQ9D3T1 429 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 NaaaQ9D7V9 362 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Spin2-ps6A0A140T8V2 174 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ctla4P09793 223 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pcmt1P23506 227 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cd38P56528 304 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fkbp14P59024 211 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Emx1Q04742 257 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pde12Q3TIU4 608 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Nrsn2Q5HZK2 202 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ugt2a2Q6PDD0 528 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Vgll4Q80V24 287 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Slc5a2Q923I7 670 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 NaxdQ9CZ42 343 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fundc2Q9D6K8 151 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 EurlQ9D7G4 290 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cypt12Q9DAR6 119 aa20.85■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Smurf2A2A5Z6 748 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr376E9Q4M1 320 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 H2-D1P14427 368 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 CebpbP28033 296 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Foxa1P35582 468 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Prelid2Q0VBB0 177 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Il18r1Q61098 537 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Slc7a6Q8BGK6 515 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pdlim5Q8CI51 591 aaKnown RBP20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Slc35a3Q8R1T4 326 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Vmn1r217Q8R270 298 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Pcdhac1Q91Y10 964 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 PsphQ99LS3 225 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ankrd10Q99LW0 415 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Hspb11Q9D6H2 143 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Twsg1Q9EP52 222 aa20.84■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Lrrc72A0A1Y7VMI0 288 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Pgbd1E9Q492 415 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 PigfO09101 219 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cx3cl1O35188 395 aa20.83■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms