RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mmp11Q02853 492 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rac2Q05144 192 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cdkn3Q810P3 211 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Plcxd3Q8BLJ3 321 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pithd1Q8BWR2 211 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Il17cQ8K4C5 194 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr315Q8VFG7 309 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Steap4Q923B6 470 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pbx4Q99NE9 378 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tmigd1Q9D7L8 261 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fcrl6A1YIY0 268 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc30a3P97441 388 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nt5eQ61503 576 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp184Q7TSH9 737 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 AgmoQ8BS35 447 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Crb3Q8QZT4 113 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sfxn2Q925N2 322 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 F10O88947 481 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 H2-K1P01901 369 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 RetP35546 1115 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 NodalP43021 354 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sec1P97353 368 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Defb41Q30KP6 65 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp36l3Q5ISE2 725 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sdc3Q64519 442 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Apex2Q68G58 516 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Eri1Q7TMF2 345 aaKnown RBP11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cts8Q9JI81 333 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 C1galt1c1Q9JMG2 316 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Oasl2Q9Z2F2 508 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm20547B8JJN0 1276 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r99H3BK37 856 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r10K7N621 847 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Il13P20109 131 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 CcnfP51944 777 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tle1Q62440 770 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nptx1Q62443 432 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pou4f3Q63955 338 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1128Q7TR47 311 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr845Q7TRG2 312 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Galnt11Q921L8 608 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Apbb2Q9DBR4 760 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Isoc2bQ9DCC7 210 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nfkb2Q9WTK5 899 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zdhhc2P59267 366 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Adamts19P59509 1210 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dvl3Q61062 716 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 CdnfQ8CC36 187 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr986Q8VFN6 312 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 GmprQ9DCZ1 345 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Acox3Q9EPL9 700 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zdhhc18Q5Y5T2 380 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ccdc117Q6PB51 277 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Bdh1Q80XN0 343 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mfsd6lQ8R3N2 586 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ffar2Q8VCK6 330 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr800Q8VFH7 311 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Socs7Q8VHQ2 579 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc25a27Q9D6D0 322 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm20715E9Q3L7 95 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Casp6O08738 276 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 LcatP16301 438 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 CryaaP24622 196 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Trmt12Q8BG71 446 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm10330Q8BKS1 112 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fam69cQ8BQT2 410 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr522Q8VGL1 312 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Snx18Q91ZR2 614 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sema4gQ9WUH7 837 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rgs21V9GXQ3 152 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr620E9PZ66 313 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r92L7N2A4 860 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Igh-1aP01865 398 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ccr1l1P51676 356 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Hrh2P97292 397 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Txnl1Q8CDN6 289 aaKnown RBP11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Uhrf1Q8VDF2 782 aaKnown RBP11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1390Q8VGW9 311 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tmem205Q91XE8 189 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zmynd19Q9CQG3 227 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 AgtrapQ9WVK0 161 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 B4galt6Q9WVK5 382 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Trpm6Q8CIR4 2028 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Agpat1O35083 285 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Opn1mwO35599 359 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fam171bQ14CH0 825 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 NfkbidQ2TB02 327 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 EndouQ3V188 412 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tnfrsf8Q60846 498 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dio1Q61153 257 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 AktipQ64362 292 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Zfp459Q8BZ17 267 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sco2Q8VCL2 255 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 4933407L21RikQ9D476 131 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Samt4Q9D4X6 233 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mmp19Q9JHI0 527 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1206A2ATJ9 307 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr225E9PWF9 419 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm3336J3QMQ6 198 aa11.26□□□□□ -0.61
Trim56-201ENSMUST00000054384 ChrneP20782 493 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms