RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Cd207Q8VBX4 331 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Prdm9Q96EQ9 843 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Mrpl43Q99N89 183 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Cmtm8Q9CZR4 173 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Mrps15Q9DC71 258 aaKnown RBP11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Ca5bQ9QZA0 317 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 PtgfrnQ9WV91 879 aa11.21□□□□□ -0.61
Rfx1-201ENSMUST00000005600 Gm44973A0A140LJJ1 189 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Rpl7a-ps5A0A140T8L3 268 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr1164A2AVT5 326 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Zfp97E9PZP6 546 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 1700080E11RikE9Q9G1 206 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 FpgtG5E8F4 590 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Cldn20G5E8X0 219 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Zfp960L7N267 546 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 S100a11P50543 98 aaKnown RBP11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Wdr20Q3UWE6 569 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Il10rbQ61190 349 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Fgl1Q71KU9 314 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Adamtsl2Q7TSK7 957 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Mrps7Q80X85 242 aaKnown RBP11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 EfhbQ8CDU5 853 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Spns1Q8R0G7 528 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tmem242Q8VCR3 140 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Znf524Q9D0B1 321 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Jam3Q9D8B7 310 aa11.21□□□□□ -0.62
Rfx1-201ENSMUST00000005600 SvaE9PX96 165 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Zfp989H3BLB0 661 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ifi203O35368 408 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 P01735 133 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 SnrpbP27048 231 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ddx6P54823 483 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 AhrrQ3U1U7 701 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tnfaip3Q60769 775 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Trmt12Q8BG71 446 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Flywch1Q8CI03 673 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Dhcr24Q8VCH6 516 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Exosc4Q921I9 245 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tktl1Q99MX0 595 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tspan31Q9CQ88 210 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Arv1Q9D0U9 266 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ttc39aA2ACP1 578 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Gm11758A2BEI6 360 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Gm11757A2BEI8 360 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Glb1l3A2RSQ1 649 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Rnf217D3YYI7 515 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Serpina3jD3Z451 420 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr1221L7MU53 311 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 AurkcO88445 282 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 PvalbP32848 110 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 DtymkP97930 212 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Atp5a1Q03265 553 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Lingo2Q3URE9 606 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ranbp3lQ6PDH4 491 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr1080Q7TR67 313 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Adam29Q811Q4 763 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Eipr1Q8K0G5 386 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Rfc3Q8R323 356 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ppp1r14cQ8R4S0 164 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr952Q8VFD7 314 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr935Q8VG16 308 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr45Q8VGM1 311 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Elovl6Q920L5 267 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr955Q9EQ97 314 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Nup210Q9QY81 1886 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Trbv21A0A0A6YX06 97 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Ms4a7E9Q9V5 267 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 RrhO35214 337 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 P58686 83 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Khdc4Q3TCX3 612 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 TfptQ3U1J1 259 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Klhl6Q6V595 619 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr657Q7TRP7 319 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Hs6st2Q80UW0 612 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Gpr68Q8BFQ3 365 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Flrt2Q8BLU0 660 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Mab21l2Q8BPP1 359 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Klhl31Q8BWA5 634 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Slc43a2Q8CGA3 568 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Mmp28Q8CGV8 520 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Mrpl15Q9CPR5 295 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Xrn2Q9DBR1 951 aaKnown RBP11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Grb14Q9JLM9 538 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Syt8Q9R0N6 395 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Col5a3Q9JLI2 1739 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Chrna10B2RX82 447 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Olfr420E9Q4G0 321 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tmem200cJ3QK46 637 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Gm3542K7N6U2 270 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Sp3O70494 783 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Thbs1P35441 1170 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 TtlP38585 377 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tspan5P62080 268 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Tbx6P70327 436 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Acp5Q05117 327 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Zrsr1Q64707 428 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Zc4h2Q68FG0 224 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Slc34a3Q80SU6 601 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Slc36a2Q8BHK3 478 aa11.2□□□□□ -0.62
Rfx1-201ENSMUST00000005600 Pou6f2Q8BJI4 691 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms