RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NEIL2	Q969S2	332 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	FAM210A	Q96ND0	272 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	EGFL8	Q99944	293 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	UTP23	Q9BRU9	249 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	NUF2	Q9BZD4	464 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	EHD1	Q9H4M9	534 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	RPRD1B	Q9NQG5	326 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	SLC6A13	Q9NSD5	602 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	UTS2R	Q9UKP6	389 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	SNX6	Q9UNH7	406 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	CMAHP	Q9Y471	501 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	OARD1	Q9Y530	152 aa		5.72	□□□□□ -1.49
CASC19-238	ENST00000641523	LRBA	P50851	2863 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	LRRC3C	A6NJW4	275 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523		A8MUI8	341 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523		H0YIV9	168 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CLDN4	O14493	209 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	LRRTM2	O43300	516 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	BANF1	O75531	89 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	NAGLU	P54802	743 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ATP6V0D1	P61421	351 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CAV1	Q03135	178 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PMPCA	Q10713	525 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	KLF10	Q13118	480 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PPP1R3A	Q16821	1122 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PAGE2B	Q5JRK9	111 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	MYO7B	Q6PIF6	2116 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	LANCL3	Q6ZV70	420 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CYS1	Q717R9	158 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PRSS41	Q7RTY9	318 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	TMPRSS11B	Q86T26	416 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	THOC6	Q86W42	341 aa	Known RBP	5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	KLHDC8A	Q8IYD2	350 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ZBED8	Q8IZ13	594 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF740	Q8NDX6	193 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CATSPER1	Q8NEC5	780 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	SLAMF9	Q96A28	289 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PYCR2	Q96C36	320 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	MAGED4	Q96JG8	741 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	OR4K3	Q96R72	315 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	KRT12	Q99456	494 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	OLFM1	Q99784	485 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CPNE1	Q99829	537 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	BCL7B	Q9BQE9	202 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CCDC77	Q9BR77	488 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	SLC39A3	Q9BRY0	314 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	EFCAB11	Q9BUY7	163 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	KATNB1	Q9BVA0	655 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	ROGDI	Q9GZN7	287 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	DERL2	Q9GZP9	239 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	RANGRF	Q9HD47	186 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	SEC14L3	Q9UDX4	400 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	PSME2	Q9UL46	239 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	UTP11	Q9Y3A2	253 aa	Known RBP	5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	MMACHC	Q9Y4U1	282 aa		5.71	□□□□□ -1.5
CASC19-238	ENST00000641523	CACNA1D	Q01668	2161 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	CRYBG3	Q68DQ2	2970 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	CELSR2	Q9HCU4	2923 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	NBPF19	A0A087WUL8	3843 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523		A0A1B0GWJ7	208 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	DPPA5	A6NC42	116 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	ANKDD1B	A6NHY2	528 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	NCF1B	A6NI72	391 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	CBY3	A6NI87	242 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	GABRR3	A8MPY1	467 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	NCF1C	A8MVU1	366 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	CHST10	O43529	356 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	LCMT2	O60294	686 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	CDC123	O75794	336 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	NKX2-2	O95096	273 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	STATH	P02808	62 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	VIM	P08670	466 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	AREG	P15514	252 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	IL7R	P16871	459 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	GAL	P22466	123 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	DNASE1	P24855	282 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	SERPINB1	P30740	379 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	TDGF1P3	P51864	188 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	TAS2R39	P59534	338 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	OC90	Q02509	493 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	SLC18A2	Q05940	514 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	NAB1	Q13506	487 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	DDX39B	Q13838	428 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	FGFBP1	Q14512	234 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	EFTUD2	Q15029	972 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	RNPS1	Q15287	305 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	RBBP5	Q15291	538 aa	Known RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	OR1C1	Q15619	314 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	KCTD19	Q17RG1	926 aa	Predicted RBP	5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	ATAD3B	Q5T9A4	648 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	AADACL4	Q5VUY2	407 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	HIST2H2AA3	Q6FI13	130 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	SULT1C3	Q6IMI6	304 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	TRIM40	Q6P9F5	258 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	TMIGD1	Q6UXZ0	262 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	GPSM1	Q86YR5	675 aa		5.7	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF679	Q8IYX0	411 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms