RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 STAC2Q6ZMT1 411 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 HDXQ7Z353 690 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 NUFIP2Q7Z417 695 aaKnown RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 CMIPQ8IY22 773 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 SLC25A43Q8WUT9 341 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 WDR60Q8WVS4 1066 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 AURKBQ96GD4 344 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 CCDC106Q9BWC9 280 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 MTHFD2LQ9H903 347 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 TPT1P8Q9HAU6 139 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 GP6Q9HCN6 339 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 CTPS2Q9NRF8 586 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 KLHL9Q9P2J3 617 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 P2RX2Q9UBL9 471 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 SPIN1Q9Y657 262 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 MED13LQ71F56 2210 aa14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 MAP1AP78559 2803 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-259ENST00000638114 PRRC2AP48634 2157 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 HMGB1P1B2RPK0 211 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 SULT2B1O00204 365 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 SIAH2O43255 324 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 ATE1O95260 518 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 DBIP07108 87 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 YES1P07947 543 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 IL7RP16871 459 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 MAGEA8P43361 318 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 IDH2P48735 452 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 DIO1P49895 249 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 IDH3AP50213 366 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 MVDP53602 400 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 DSTNP60981 165 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 C22orf34Q6ZV56 151 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 GRINAQ7Z429 371 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 PEX5LQ8IYB4 626 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 EBF4Q9BQW3 602 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 CXXC4Q9H2H0 198 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 INTS9Q9NV88 658 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 CHRNA9Q9UGM1 479 aa14.92□□□□□ -0.02
CACNA1A-259ENST00000638114 AP3D1O14617 1153 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 SMAD9O15198 467 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 ADAM11O75078 769 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 BCHEP06276 602 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 FESP07332 822 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 PPP3CBP16298 524 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 KLK2P20151 261 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 RPS4Y1P22090 263 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 AQP5P55064 265 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 CSNK2A1P68400 391 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 RASGEF1BQ0VAM2 473 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 MRPL2Q5T653 305 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 SLC2A7Q6PXP3 512 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 TFAP2EQ6VUC0 442 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 TMPPEQ6ZT21 453 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 GTF2H4Q92759 462 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 PMM1Q92871 262 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 MBD6Q96DN6 1003 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 DNAJA3Q96EY1 480 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 ALPK1Q96QP1 1244 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 PSD2Q9BQI7 771 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 TACO1Q9BSH4 297 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 ACTR6Q9GZN1 396 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 CALML5Q9NZT1 146 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 GPR52Q9Y2T5 361 aa14.91□□□□□ -0.02
CACNA1A-259ENST00000638114 TMEM247A6NEH6 219 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CYTIPO60759 359 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 THBDP07204 575 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CCNA2P20248 432 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 PSMB1P20618 241 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 HTR3AP46098 478 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CRISP3P54108 245 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 PPP2R2AP63151 447 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 MAPK11Q15759 364 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 DEFB113Q30KQ7 82 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 LIN52Q52LA3 116 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CXorf67Q86X51 503 aaPredicted RBP14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CCDC28BQ9BUN5 200 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 OR11A1Q9GZK7 315 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 PAIP1Q9H074 479 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 VIPAS39Q9H9C1 493 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 BCO1Q9HAY6 547 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 PCDHB14Q9Y5E9 798 aa14.9□□□□□ -0.02
CACNA1A-259ENST00000638114 CFAP73A6NFT4 308 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 NR5A2O00482 541 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 TFPTP0C1Z6 253 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 UQCRBP14927 111 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 H2AFXP16104 143 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 MRPL19P49406 292 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 RPS26P11Q5JNZ5 115 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 VRK2Q86Y07 508 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 ADGRG3Q86Y34 549 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 WFDC8Q8IUA0 241 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 GABRG1Q8N1C3 465 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 OR52P1PQ8NH57 321 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 SLC38A5Q8WUX1 472 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 ZNF775Q96BV0 537 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 ZHX1-C8orf76Q96EF9 292 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 TMEM19Q96HH6 336 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 ARL5BQ96KC2 179 aa14.89□□□□□ -0.03
CACNA1A-259ENST00000638114 HS3ST6Q96QI5 342 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms