RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TIMP4Q99727 224 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 FBXL4Q9UKA2 621 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 CACNA1IQ9P0X4 2223 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 A0A1W2PQL4 384 aaPredicted RBP19.76■□□□□ 0.75
CLN6-224ENST00000638076 TTC36A6NLP5 189 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 MRPL3P09001 348 aaKnown RBP19.76■□□□□ 0.75
CLN6-224ENST00000638076 SPNP16150 400 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 BCKDHBP21953 392 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 CAV3P56539 151 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 DEFA1P59665 94 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 DEFA3P59666 94 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 CD300CQ08708 224 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.76■□□□□ 0.75
CLN6-224ENST00000638076 COQ7Q99807 217 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 MKKSQ9NPJ1 570 aaPredicted RBP19.76■□□□□ 0.75
CLN6-224ENST00000638076 MUTYHQ9UIF7 546 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 SPAG17Q6Q759 2223 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 A8MUA0 341 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 H3BMH7 237 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 CASKO14936 926 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 SLC2A5P22732 501 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 GPR143P51810 404 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 ZNF79Q15937 498 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 MED25Q71SY5 747 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 MARCH9Q86YJ5 346 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 SIX5Q8N196 739 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 CAMKK1Q8N5S9 505 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 OR7G1Q8NGA0 311 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 MIXL1Q9H2W2 232 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 BABAM2Q9NXR7 383 aa19.76■□□□□ 0.75
CLN6-224ENST00000638076 DHCR7Q9UBM7 475 aaKnown RBP19.76■□□□□ 0.75
CLN6-224ENST00000638076 IGHV1OR21-1A0A087WYE8 117 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 GYPBP06028 91 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 ARL4DP49703 201 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 HSD11B2P80365 405 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 BDH1Q02338 343 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 BIKQ13323 160 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 GALEQ14376 348 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 SNAP47Q5SQN1 464 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 PRAMEF17Q5VTA0 474 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 ARHGAP11AQ6P4F7 1023 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 GATSQ8NAP1 163 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 DNAJA4Q8WW22 397 aaPredicted RBP19.75■□□□□ 0.75
CLN6-224ENST00000638076 ERMAPQ96PL5 475 aaPredicted RBP19.75■□□□□ 0.75
CLN6-224ENST00000638076 PRO3102Q9H379 93 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 ASB6Q9NWX5 421 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 GMEB2Q9UKD1 530 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 A0A087WUJ7 227 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 CD8B2A6NJW9 211 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 CD8BP10966 210 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 SLC37A1P57057 533 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 KRR1Q13601 381 aaKnown RBP19.75■□□□□ 0.75
CLN6-224ENST00000638076 KLHL26Q53HC5 615 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 PTCRAQ6ISU1 281 aaPredicted RBP19.75■□□□□ 0.75
CLN6-224ENST00000638076 LRRC17Q8N6Y2 441 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 OR5M3Q8NGP4 307 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 NEIL3Q8TAT5 605 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 TSLPQ969D9 159 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 SGTBQ96EQ0 304 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 SHDQ96IW2 340 aa19.75■□□□□ 0.75
CLN6-224ENST00000638076 TMEM265A0A087WTH1 108 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 LRRN3E7EW58 273 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 AZGP1P25311 298 aaKnown RBP19.74■□□□□ 0.75
CLN6-224ENST00000638076 CFHR1Q03591 330 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 GDPD3Q7L5L3 318 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 SPEM1Q8N4L4 309 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 GALNT6Q8NCL4 622 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 AP3S1Q92572 193 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 LRRN3Q9H3W5 708 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 ADGRL4Q9HBW9 690 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 SIRT4Q9Y6E7 314 aaPredicted RBP19.74■□□□□ 0.75
CLN6-224ENST00000638076 POLR1CO15160 346 aaPredicted RBP19.74■□□□□ 0.75
CLN6-224ENST00000638076 RNF13O43567 381 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 NDUFB2O95178 105 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 IFNGP01579 166 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 SBK2P0C263 348 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 DDI2Q5TDH0 399 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 DESI1Q6ICB0 168 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 SLC43A2Q8N370 569 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 OR52E2Q8NGJ4 325 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 C3orf49Q96BT1 292 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 OR8D2Q9GZM6 311 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 SRRQ9GZT4 340 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 INPP5EQ9NRR6 644 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 WNT16Q9UBV4 365 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 MMACHCQ9Y4U1 282 aa19.74■□□□□ 0.75
CLN6-224ENST00000638076 C2orf92A0A1B0GVN3 265 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 SHISA3A0PJX4 238 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 FAM131AQ6UXB0 335 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 TMEM91Q6ZNR0 172 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 TMEM151BQ8IW70 566 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 SMAP2Q8WU79 429 aaPredicted RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 HLA-CQ95604 372 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 DIRAS2Q96HU8 199 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 CHRNA9Q9UGM1 479 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 SERTAD3Q9UJW9 196 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 ICAM5Q9UMF0 924 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 MN1Q10571 1320 aaPredicted RBP19.73■□□□□ 0.75
CLN6-224ENST00000638076 MCIDASD6RGH6 385 aa19.73■□□□□ 0.75
CLN6-224ENST00000638076 NUDT21O43809 227 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms