RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PDK3Q15120 406 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 PPA1Q15181 289 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 ETFDHQ16134 617 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 PGGHGQ32M88 737 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 SYT14P1Q58G82 188 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 ANXA8L1Q5VT79 327 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 TYW3Q6IPR3 259 aaKnown RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 EMBQ6PCB8 327 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 MTDHQ86UE4 582 aaKnown RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 FAM71CQ8NEG0 241 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 KBTBD8Q8NFY9 601 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 SLC25A43Q8WUT9 341 aaPredicted RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 CCDC106Q9BWC9 280 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 DPY30Q9C005 99 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 C20orf27Q9GZN8 174 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 POLE3Q9NRF9 147 aa16.33■□□□□ 0.2
CLN6-220ENST00000637450 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 MAGED1Q9Y5V3 778 aaPredicted RBP16.33■□□□□ 0.2
CLN6-220ENST00000637450 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 BIRC5O15392 142 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 BCAS1O75363 584 aaPredicted RBP16.32■□□□□ 0.2
CLN6-220ENST00000637450 PGM3O95394 542 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 CPSF4O95639 269 aaKnown RBP16.32■□□□□ 0.2
CLN6-220ENST00000637450 FESP07332 822 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 THBS1P07996 1170 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 MYZAPP0CAP1 466 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 COX5AP20674 150 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 IGHV1-2P23083 117 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 CDKN1AP38936 164 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 KRTAP1-1Q07627 177 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 CHI3L2Q15782 390 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 STK11Q15831 433 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 TIMM23BQ5SRD1 257 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 ATAD3BQ5T9A4 648 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 SAXO2Q658L1 398 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 TNFAIP8L2Q6P589 184 aaPredicted RBP16.32■□□□□ 0.2
CLN6-220ENST00000637450 SSX8Q7RTT4 187 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.32■□□□□ 0.2
CLN6-220ENST00000637450 P2RY8Q86VZ1 359 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 ANKRD46Q86W74 232 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 ZNF100Q8IYN0 542 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 VPS37AQ8NEZ2 397 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 RAB8BQ92930 207 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 GTPBP3Q969Y2 492 aaKnown RBP16.32■□□□□ 0.2
CLN6-220ENST00000637450 TESCQ96BS2 214 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 ZG16BQ96DA0 208 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 MUCL1Q96DR8 90 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 CTPS2Q9NRF8 586 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 LIPT1Q9Y234 373 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 SLC35A3Q9Y2D2 325 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 RAP2CQ9Y3L5 183 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 WDR45Q9Y484 360 aa16.32■□□□□ 0.2
CLN6-220ENST00000637450 A0A1W2PP18 115 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 RNF223E7ERA6 249 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 ANKRD28O15084 1053 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 RAMP1O60894 148 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 CD8AP01732 235 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 GGT1P19440 569 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 RPL14P50914 215 aaKnown RBP16.31■□□□□ 0.2
CLN6-220ENST00000637450 FUT5Q11128 374 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 VEZF1Q14119 521 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 CASP8Q14790 479 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 ABLIM2Q6H8Q1 611 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 FRRS1Q6ZNA5 592 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 ZNF433Q8N7K0 673 aaPredicted RBP16.31■□□□□ 0.2
CLN6-220ENST00000637450 ROPN1LQ96C74 230 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 NEURL3Q96EH8 262 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 SORT1Q99523 831 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 MDFIQ99750 246 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 GRIP2Q9C0E4 1043 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 CISD1Q9NZ45 108 aaKnown RBP16.31■□□□□ 0.2
CLN6-220ENST00000637450 EMC3Q9P0I2 261 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
CLN6-220ENST00000637450 SPIN1Q9Y657 262 aaPredicted RBP16.31■□□□□ 0.2
CLN6-220ENST00000637450 GOLGA8QA0A0J9YX86 632 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 PRAMEF27A3QJZ7 478 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 GOLGA8OA6NCC3 632 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 SHISA9B4DS77 424 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 GOLGA8NF8WBI6 632 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 SNUPNO95149 360 aaKnown RBP16.3■□□□□ 0.2
CLN6-220ENST00000637450 TFPIP10646 304 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 FKBP2P26885 142 aaKnown RBP16.3■□□□□ 0.2
CLN6-220ENST00000637450 RYKP34925 604 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 KCNJ10P78508 379 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 FBXW9Q5XUX1 488 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 WDR93Q6P2C0 686 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 ADGRG3Q86Y34 549 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 ZNF563Q8TA94 476 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 ARL5BQ96KC2 179 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 TRAF4Q9BUZ4 470 aaPredicted RBP16.3■□□□□ 0.2
CLN6-220ENST00000637450 REG4Q9BYZ8 158 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 SLCO5A1Q9H2Y9 848 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 SSU72Q9NP77 194 aaKnown RBP16.3■□□□□ 0.2
CLN6-220ENST00000637450 EXOSC3Q9NQT5 275 aaKnown RBP16.3■□□□□ 0.2
CLN6-220ENST00000637450 NPAP1Q9NZP6 1156 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
CLN6-220ENST00000637450 HDGFL3Q9Y3E1 203 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms