RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NPIPA2E9PIF3 369 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 NPIPA3F8WFD2 350 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 BCKDKO14874 412 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 EFNA2O43921 213 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 POU3F2P20265 443 aaPredicted RBP14.44□□□□□ -0.1
CLN6-216ENST00000636876 IL11P20809 199 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 APOBEC1P41238 236 aaKnown RBP14.44□□□□□ -0.1
CLN6-216ENST00000636876 STARP49675 285 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 LHX2P50458 406 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 POLR2HP52434 150 aaKnown RBP14.44□□□□□ -0.1
CLN6-216ENST00000636876 KCNC4Q03721 635 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 RBPJQ06330 500 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 OR1Q1Q15612 314 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 IGFBP7Q16270 282 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 BCL2A1Q16548 175 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 C3orf49Q96BT1 292 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 PYURFQ96I23 114 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 TRIM15Q9C019 465 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 TMEM27Q9HBJ8 222 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 CTPS2Q9NRF8 586 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 OSGIN1Q9UJX0 560 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 ACAD8Q9UKU7 415 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 ZNF835Q9Y2P0 537 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 AP4B1Q9Y6B7 739 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 V9GYQ6 96 aa14.44□□□□□ -0.1
CLN6-216ENST00000636876 TMED7-TICAM2A0A0A6YYA0 188 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 TCRBV5S2A0A599 114 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 H3BML4 177 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 IFNW1P05000 195 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 PEPDP12955 493 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 CPN1P15169 458 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 ABOP16442 354 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 TACR3P29371 465 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 RAC1P63000 192 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 SELENBP1Q13228 472 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 ZSCAN26Q16670 478 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 ENTPD8Q5MY95 495 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 WLSQ5T9L3 541 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 C3orf33Q6P1S2 294 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 POMZP3Q6PJE2 187 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 Q6ZPB1 254 aaPredicted RBP14.43□□□□□ -0.1
CLN6-216ENST00000636876 ATG4DQ86TL0 474 aaPredicted RBP14.43□□□□□ -0.1
CLN6-216ENST00000636876 FAM57AQ8TBR7 257 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 PHF10Q8WUB8 498 aaKnown RBP14.43□□□□□ -0.1
CLN6-216ENST00000636876 DNAJA4Q8WW22 397 aaPredicted RBP14.43□□□□□ -0.1
CLN6-216ENST00000636876 SMPDL3BQ92485 455 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 UTP4Q969X6 686 aaKnown RBP14.43□□□□□ -0.1
CLN6-216ENST00000636876 WDYHV1Q96HA8 205 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 LRGUKQ96M69 825 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 SERINC1Q9NRX5 453 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 STOML1Q9UBI4 398 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 TMED7Q9Y3B3 224 aa14.43□□□□□ -0.1
CLN6-216ENST00000636876 A0A0B4J2E0 115 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 A0A1B0GX12 115 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 CPSF4LA6NMK7 179 aaKnown RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 SLC19A2O60779 497 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 SEMG1P04279 462 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 TPOP07202 933 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 ZNF708P17019 499 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 CLDN18P56856 261 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 MRPL49Q13405 166 aaKnown RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 FLOT2Q14254 428 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 C3AR1Q16581 482 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.42□□□□□ -0.1
CLN6-216ENST00000636876 ZNF613Q6PF04 617 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 DEF8Q6ZN54 512 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 TSPYL5Q86VY4 417 aaPredicted RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 ATCAYQ86WG3 371 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 ADGRG3Q86Y34 549 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 PM20D2Q8IYS1 436 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 LILRA2Q8N149 483 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 OR5M9Q8NGP3 310 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 POP5Q969H6 163 aaKnown RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 C7orf34Q96L11 122 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 AMBRA1Q9C0C7 1298 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 POLR2J2Q9GZM3 115 aaKnown RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 PRDM14Q9GZV8 571 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 POLR2J3Q9H1A7 115 aaKnown RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 TMEM185BQ9H7F4 350 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 C12orf10Q9HB07 376 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 CHRNA9Q9UGM1 479 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 SPIN1Q9Y657 262 aaPredicted RBP14.42□□□□□ -0.1
CLN6-216ENST00000636876 ESPL1Q14674 2120 aa14.42□□□□□ -0.1
CLN6-216ENST00000636876 TRAPPC13A5PLN9 417 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 AQP12BA6NM10 295 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 SEMA7AO75326 666 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 CXCR1P25024 350 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 SHC1P29353 583 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 CLDN20P56880 219 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 GXYLT1Q4G148 440 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 ALG10BQ5I7T1 473 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 EMC4Q5J8M3 183 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 SWT1Q5T5J6 900 aaKnown RBP14.41□□□□□ -0.1
CLN6-216ENST00000636876 ULK3Q6PHR2 472 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 GGNQ86UU5 652 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 CD163Q86VB7 1156 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 AQP12AQ8IXF9 295 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 UBQLNLQ8IYU4 475 aa14.41□□□□□ -0.1
CLN6-216ENST00000636876 MEIOBQ8N635 442 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms