RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 PSD2Q9BQI7 771 aa13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 HDHD5Q9BXW7 423 aa13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 EXOSC3Q9NQT5 275 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 MED13LQ71F56 2210 aa13.35□□□□□ -0.27
CACNA1A-230ENST00000636768 PRAMEF27A3QJZ7 478 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 CLDN24A6NM45 220 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 SULT2B1O00204 365 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 ARHGEF9O43307 516 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 KLF4O43474 513 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 GCM2O75603 506 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 SLC22A3O75751 556 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 ANP32DO95626 131 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 KRT75O95678 551 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 IL6P05231 212 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 FESP07332 822 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 CHRM4P08173 479 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 NR2F1P10589 423 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 LOXP28300 417 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 HOXC12P31275 282 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 GNA13Q14344 377 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 SLC9B1Q4ZJI4 515 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 COX20Q5RI15 118 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 SHEQ5VZ18 495 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 ZNF704Q6ZNC4 412 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 TMPPEQ6ZT21 453 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 GRINAQ7Z429 371 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 CMIPQ8IY22 773 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 GABRG1Q8N1C3 465 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 KISS1RQ969F8 398 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 PLPPR2Q96GM1 343 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 MAELQ96JY0 434 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 CCDC106Q9BWC9 280 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 SLC38A1Q9H2H9 487 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 CHRNA9Q9UGM1 479 aa13.34□□□□□ -0.27
CACNA1A-230ENST00000636768 AGAP5A6NIR3 686 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 UBDO15205 165 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 CYTIPO60759 359 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ADAP00813 363 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 FOSL1P15407 271 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 IL7RP16871 459 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 IDH2P48735 452 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 P2RY6Q15077 328 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 GSTA3Q16772 222 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 Q5PR19 223 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 SFRP5Q5T4F7 317 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 AP1ARQ63HQ0 302 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 MAVSQ7Z434 540 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 CNOT9Q92600 299 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF775Q96BV0 537 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ZHX1-C8orf76Q96EF9 292 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF300Q96RE9 604 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 RMND5AQ9H871 391 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 DLL4Q9NR61 685 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ZIM2Q9NZV7 527 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 EMC3Q9P0I2 261 aa13.33□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF724A8MTY0 619 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 KLF11O14901 512 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 UQCRBP14927 111 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 CCNA2P20248 432 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 CRATP43155 626 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 HTR3AP46098 478 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 OR3A2P47893 321 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 ITGADQ13349 1161 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 CAPRIN1Q14444 709 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 C6orf10Q5SRN2 563 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 GALNT5Q7Z7M9 940 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 PEX5LQ8IYB4 626 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 LRRC75A-AS1Q8N1F1 130 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF75CPQ92670 426 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 DNAJA3Q96EY1 480 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 PERPQ96FX8 193 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 ITCHQ96J02 903 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 OR52B2Q96RD2 323 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 MTHFD2LQ9H903 347 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 NGBQ9NPG2 151 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 SDR39U1Q9NRG7 319 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 P2RX2Q9UBL9 471 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 PRSS50Q9UI38 385 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 HDGFL3Q9Y3E1 203 aa13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 NUP214P35658 2090 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-230ENST00000636768 CFAP73A6NFT4 308 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 AP3D1O14617 1153 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 ADAM11O75078 769 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 PMS2P2O95744 297 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 FKBP2P26885 142 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 MAGEA8P43361 318 aa13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 POLR2JP52435 117 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-230ENST00000636768 PLAURQ03405 335 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms