RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 PGDP52209 483 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 ZNF85Q03923 595 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 GPM6BQ13491 265 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 FAM53BQ14153 422 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 TOMM5Q8N4H5 51 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 FAM3CQ92520 227 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 GAL3ST3Q96A11 431 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 TSSK2Q96PF2 358 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 RSPH9Q9H1X1 276 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
CACNA1A-228ENST00000636610 H0YGG7 62 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 SEC14L5O43304 696 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 C1QBP02746 253 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 LSSP48449 732 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 ARF3P61204 181 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 PLAURQ03405 335 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 GPR18Q14330 331 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 GALEQ14376 348 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 RFPL4BQ6ZWI9 263 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 GJD3Q8N144 294 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 ZNF655Q8N720 491 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 ZNF431Q8TF32 576 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 OR2M4Q96R27 311 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 TIMM29Q9BSF4 260 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 CACNG6Q9BXT2 260 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 PITHD1Q9GZP4 211 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 ASB6Q9NWX5 421 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 FLRT3Q9NZU0 649 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 POLHQ9Y253 713 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 SIGLEC7Q9Y286 467 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 SLC17A4Q9Y2C5 497 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 VPS13AQ96RL7 3174 aa12.96□□□□□ -0.33
CACNA1A-228ENST00000636610 TEX13CA0A0J9YWL9 993 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 CHP2O43745 196 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 RDH16O75452 317 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 TRAPPC2P0DI81 140 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 TRAPPC2BP0DI82 140 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 C5AR1P21730 350 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ADPRHP54922 357 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 SUZ12Q15022 739 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 FIGLAQ6QHK4 219 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 KIAA1324Q6UXG2 1013 aaKnown RBP12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 TCTE3Q8IZS6 198 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 OR2A5Q96R48 311 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 TCEAL2Q9H3H9 227 aaPredicted RBP12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ADGRL4Q9HBW9 690 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 ISYNA1Q9NPH2 558 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 IER3IP1Q9Y5U9 82 aa12.96□□□□□ -0.34
CACNA1A-228ENST00000636610 HEATR5AQ86XA9 2040 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 A0A1B0GWA3 101 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SSNA1O43805 119 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SELENOFO60613 162 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC19A2O60779 497 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC43A1O75387 559 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 TFP02787 698 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 UGT2B7P16662 529 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 RAB3BP20337 219 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 FCARP24071 287 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SLC6A1P30531 599 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 C1orf61Q13536 156 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 LRRC28Q86X40 367 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 SNX33Q8WV41 574 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 THAP4Q8WY91 577 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 RAB11FIP5Q9BXF6 653 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 MPDZO75970 2070 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 OR10H2O60403 315 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 CELA2BP08218 269 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 NID1P14543 1247 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 COL9A1P20849 921 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 AHCYP23526 432 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 BTCP35070 178 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 MTNR1BP49286 362 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 CCR4P51679 360 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 FGFBP1Q14512 234 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 POU4F3Q15319 338 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 AMZ1Q400G9 498 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 ALG10BQ5I7T1 473 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 OR52R1Q8NGF1 315 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 OR8K3Q8NH51 312 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 TRIM63Q969Q1 353 aa12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 ZNF764Q96H86 408 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-228ENST00000636610 COQ7Q99807 217 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms