RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GM2AP17900 193 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TMPRSS11FQ6ZWK6 438 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 YRDCQ86U90 279 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 CTBSQ01459 385 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ADIPOR2Q86V24 386 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 OR5M9Q8NGP3 310 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 EDAQ92838 391 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 BMFQ96LC9 184 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MS4A4EQ96PG1 132 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 BTBD2Q9BX70 525 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 CRABP1P29762 137 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MTNR1AP48039 350 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 AAED1Q7RTV5 226 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 NEIL2Q969S2 332 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SGK3Q96BR1 496 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 RNF150Q9ULK6 438 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 CLDN1O95832 211 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 PTP4A2Q12974 167 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 PNCKQ6P2M8 343 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 B3GLCTQ6Y288 498 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 BEST4Q8NFU0 473 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 OR10X1Q8NGY0 326 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 DHRS9Q9BPW9 319 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 INHBCP55103 352 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MTCP1P56278 107 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 FAM78AQ5JUQ0 283 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF684Q5T5D7 378 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ZDHHC24Q6UX98 284 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SULF2Q8IWU5 870 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ABHD4Q8TB40 342 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 PRRC1Q96M27 445 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ONECUT1Q9UBC0 465 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 TRAPPC13A5PLN9 417 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SOX15O60248 233 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC22A5O76082 557 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SORBS2O94875 1100 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MAOAP21397 527 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 CD1CP29017 333 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 CLDN6P56747 220 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 REEP6Q96HR9 211 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 C16orf70Q9BSU1 422 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MED18Q9BUE0 208 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 ERVMER34-1Q9H9K5 563 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 OR6C2Q9NZP2 312 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 OR2T1O43869 369 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 HNRNPH3P31942 346 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 MAP2K3P46734 347 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 YTHDF3Q7Z739 585 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 WDR31Q8NA23 367 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 OR5D14Q8NGL3 314 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 CNOT9Q92600 299 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 NMNAT1Q9HAN9 279 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 TEX264Q9Y6I9 313 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 PRSS21Q9Y6M0 314 aa16.69■□□□□ 0.26
CACNA1A-227ENST00000636549 SURF4O15260 269 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 CHATP28329 748 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 AHRP35869 848 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 ACBD7Q8N6N7 88 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 CNTNAP3BQ96NU0 1288 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 NMES1Q9C002 83 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC38A1Q9H2H9 487 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 BARX1Q9HBU1 254 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 RAB9BQ9NP90 201 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PCDHGA5Q9Y5G8 931 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 MYH7P12883 1935 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 NCBP2LA6PVI3 153 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 GPR19Q15760 415 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PIGTQ969N2 578 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 CMSS1Q9BQ75 279 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 ABCG5Q9H222 651 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 SEC14L4Q9UDX3 406 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PRPH2P23942 346 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 SERPINF1P36955 418 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 CEACAM7Q14002 265 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 RPL13AP3Q6NVV1 102 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 TMEM200AQ86VY9 491 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 A0A096LPE4 126 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 A0A1W2PPZ6 126 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 M6PRP20645 277 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC5A2P31639 672 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 MEDAGQ5VYS4 303 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 ATG9BQ674R7 924 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PODNL1Q6PEZ8 512 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 POTEKPQ9BYX7 375 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 PRELID1Q9Y255 219 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 TBX10O75333 385 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 RAB3DO95716 219 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 SNCAP37840 140 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 TNK1Q13470 666 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 C12orf42Q96LP6 360 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 INTS14Q96SY0 518 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 NPY6RQ99463 290 aa16.68■□□□□ 0.26
CACNA1A-227ENST00000636549 GFRA2O00451 464 aa16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 TERTO14746 1132 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-227ENST00000636549 DRD2P14416 443 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms