RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SCAMP4Q969E2 229 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC38A1Q9H2H9 487 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 EHFQ9NZC4 300 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RBPJLQ9UBG7 517 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CHRNA9Q9UGM1 479 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NAV1Q8NEY1 1877 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ANKRD26Q9UPS8 1709 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR2M5A3KFT3 312 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 H3BQ06 376 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CLIC3O95833 236 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HPRP00739 348 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HBE1P02100 147 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SPP1P10451 314 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 MFGE8Q08431 387 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 C9orf135Q5VTT2 229 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NADSYN1Q6IA69 706 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ERMP1Q7Z2K6 904 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ADIPOR2Q86V24 386 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 BPIFCQ8NFQ6 507 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CMASQ8NFW8 434 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF420Q8TAQ5 688 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZFPM2Q8WW38 1151 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 FAM173AQ9BQD7 235 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 BARHL1Q9BZE3 327 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HEBP1Q9NRV9 189 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RIMBP3CA6NJZ7 1639 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RIMBP3BA6NNM3 1639 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 RIMBP3Q9UFD9 1639 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CDK5RAP2Q96SN8 1893 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 BET1O15155 118 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 FADS1O60427 444 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 ARAFP10398 606 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 UNGP13051 313 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-209ENST00000635750 NDUFB7P17568 137 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 ENPP1P22413 925 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 PRKACGP22612 351 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 HLA-FP30511 346 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 GDF10P55107 478 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SIM1P81133 766 aaPredicted RBP5.21□□□□□ -1.57
SCN1A-209ENST00000635750 RTL8BQ17RB0 113 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 FAM69AQ5T7M9 428 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SHEQ5VZ18 495 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 Q6ZRG5 221 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 MCATQ8IVS2 390 aaKnown RBP5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SYNPRQ8TBG9 265 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SAMD8Q96LT4 415 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 S1PR3Q99500 378 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 C1orf198Q9H425 327 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SLC6A20Q9NP91 592 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 OLAHQ9NV23 265 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 C1orf123Q9NWV4 160 aa5.21□□□□□ -1.57
SCN1A-209ENST00000635750 SETD1AO15047 1707 aaKnown RBP5.21□□□□□ -1.57
SCN1A-209ENST00000635750 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SIGLEC6O43699 453 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 FUT1P19526 365 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MAKP20794 623 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ITGB8P26012 769 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 GGT5P36269 586 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HNRNPFP52597 415 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MTCP1P56278 107 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TEKQ02763 1124 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LTB4RQ15722 352 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TSSK4Q6SA08 328 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HMGN2P46Q86SG4 172 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ST8SIA2Q92186 375 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NMES1Q9C002 83 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LIN7BQ9HAP6 207 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 BARX1Q9HBU1 254 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 QPCTLQ9NXS2 382 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NCBP2LA6PVI3 153 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM233B4DJY2 109 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 YIF1AO95070 293 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 GOSR1O95249 250 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CA3P07451 260 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CKMT2P17540 419 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HTR2BP41595 481 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MRPL19P49406 292 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 INHBCP55103 352 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SRPXP78539 464 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NFATC4Q14934 902 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MEP1BQ16820 701 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 OGFOD3Q6PK18 319 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LYPD8Q6UX82 237 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 FAM57BQ71RH2 274 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM104Q8NE00 496 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 OR1M1Q8NGA1 313 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 OR56B4Q8NH76 319 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 PHOSPHO2Q8TCD6 241 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MUL1Q969V5 352 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 UBQLN4Q9NRR5 601 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 A8MV72 311 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 RNASET2O00584 256 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TXNL1O43396 289 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 PLRG1O43660 514 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TFP02787 698 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LAPTM4AQ15012 233 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ELP2Q6IA86 826 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LCN10Q6JVE6 187 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms