RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ABATP80404 500 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CHIT1Q13231 466 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 NEDD8Q15843 81 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RFX4Q33E94 735 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 IQCCQ4KMZ1 466 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 GPR107Q5VW38 600 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 OR4F3Q6IEY1 312 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 GRHL2Q6ISB3 625 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 AGTRAPQ6RW13 159 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ANKRD46Q86W74 232 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HIPK1Q86Z02 1210 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 DRAXINQ8NBI3 349 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 OR56A3Q8NH54 315 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 TBC1D15Q8TC07 691 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SGCDQ92629 289 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 MUL1Q969V5 352 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HIST1H2AHQ96KK5 128 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HRASLS5Q96KN8 279 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HIST1H2AJQ99878 128 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 REXO4Q9GZR2 422 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FAM120CQ9NX05 1096 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 VPS13CQ709C8 3753 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 DNHD1Q96M86 4753 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 DOCK7Q96N67 2140 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 KLRC4-KLRK1H3BQV0 150 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 M0QX08 132 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 WWP2O00308 870 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RFXANKO14593 260 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ADAM10O14672 748 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SH3BGRLO75368 114 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ALOX12P18054 663 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PCMT1P22061 227 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ACVR2AP27037 513 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CHRNB4P30926 498 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 UQCRC1P31930 480 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 HSD17B2P37059 387 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ENTPD1P49961 510 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CRYBA2P53672 197 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RPS16P62249 146 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PPIAP62937 165 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RAE1P78406 368 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SLC13A2Q13183 592 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 TOP3AQ13472 1001 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ARHGAP19Q14CB8 494 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FGD3Q5JSP0 725 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ARHGAP11AQ6P4F7 1023 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ERICH5Q6P6B1 374 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 TREML4Q6UXN2 200 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RNF175Q8N4F7 328 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FAM81AQ8TBF8 368 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 NCLNQ969V3 563 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 OR4K3Q96R72 315 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 BTBD2Q9BX70 525 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 POLDIP3Q9BY77 421 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 LDAHQ9H6V9 325 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 BRF2Q9HAW0 419 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PLGRKTQ9HBL7 147 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 MMP25Q9NPA2 562 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 IL1RAPQ9NPH3 570 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM184CQ9NVA4 438 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PAK1IP1Q9NWT1 392 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 GALNT8Q9NY28 637 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ABCG2Q9UNQ0 655 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SAMD4AQ9UPU9 718 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 KLF13Q9Y2Y9 288 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PCDHGB1Q9Y5G3 927 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 FREM3P0C091 2139 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 LOC100130705A0A1B0GUX0 176 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 C1orf226A1L170 272 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ZC3H12DA2A288 527 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 A8MVJ9 347 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SLC1A7O00341 560 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SCAMP2O15127 329 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 WIPF1O43516 503 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PRKNO60260 465 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 NME2P1O60361 137 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ITGA10O75578 1167 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ABCB1P08183 1280 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CCDC159P0C7I6 412 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 KLK2P20151 261 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 RGS1Q08116 209 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 DOC2AQ14183 400 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 VMACQ2NL98 169 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF750Q32MQ0 723 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 LRRC23Q53EV4 343 aaPredicted RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 KDM4DQ6B0I6 523 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ANKRD26P1Q6NSI1 321 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SPNS3Q6ZMD2 512 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SLC16A12Q6ZSM3 486 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 PIWIL3Q7Z3Z3 882 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 TMPRSS11BQ86T26 416 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CYP4Z1Q86W10 505 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 THOC6Q86W42 341 aaKnown RBP4.42□□□□□ -1.7
LINC00550-201ENST00000629293 CROCCP3Q8IVE0 287 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ZDHHC21Q8IVQ6 265 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 SIAH3Q8IW03 269 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 ZNF555Q8NEP9 628 aa4.42□□□□□ -1.7
LINC00550-201ENST00000629293 OR7A2PQ8NGA2 310 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms