RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 TAS2R46P59540 309 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 HTD2P86397 168 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 TLE4Q04727 773 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ZNF705AQ6ZN79 300 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 MAMDC2Q7Z304 686 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 RDH10Q8IZV5 341 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 OR2A12Q8NGT7 310 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 UCN3Q969E3 161 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MSLNLQ96KJ4 702 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 TMEM121BQ9BXQ6 578 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 SRRQ9GZT4 340 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MVB12BQ9H7P6 319 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MCCC2Q9HCC0 563 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 Q9Y3F1 56 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MROH6A6NGR9 719 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SCGB2A1O75556 95 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CALCRP30988 508 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 UPP1Q16831 310 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 Q6ZVL8 140 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 KLHDC8BQ8IXV7 354 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ZFP82Q8N141 532 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 OR51T1Q8NGJ9 327 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 FZD3Q9NPG1 666 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 C1orf123Q9NWV4 160 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CYB5R1Q9UHQ9 305 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GJD2Q9UKL4 321 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SPO11Q9Y5K1 396 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SNRPGP15A8MWD9 76 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SYT7O43581 403 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 OR2T7P0C7T2 308 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 PNMTP11086 282 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 PGCP20142 388 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CRABP1P29762 137 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 PDGFRLQ15198 375 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ZNF805Q5CZA5 627 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 UNQ6126/PRO20091Q6UXV3 157 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SH2D5Q6ZV89 423 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 OR2T27Q8NH04 317 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 BORCS8Q96FH0 119 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GPX5O75715 221 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 AHRP35869 848 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 DLEU7Q6UYE1 221 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SLC43A2Q8N370 569 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CREB3L4Q8TEY5 395 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SYT17Q9BSW7 474 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TMEM38AQ9H6F2 299 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 IL17CQ9P0M4 197 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 IGKV6D-21A0A0A0MT36 114 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TCRBV5S1A1TA0A578 114 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 HMX2A2RU54 273 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 MEIS3P1A6NDR6 274 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TAAR5O14804 337 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
VCL-206ENST00000623461 FBXO24O75426 580 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 STATHP02808 62 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CCR7P32248 378 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ZNF41P51814 821 aaPredicted RBP8.35□□□□□ -1.07
VCL-206ENST00000623461 CATSPEREQ5SY80 951 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TTC9Q92623 222 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ARHGAP9Q9BRR9 750 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 NARFLQ9H6Q4 476 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ICKQ9UPZ9 632 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 MTMR11A4FU01 709 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 DFFBO76075 338 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GPX2P18283 190 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GABRB1P18505 474 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SPINT3P49223 89 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 RPE65Q16518 533 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 STEAP1BQ6NZ63 245 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SLAIN1Q8ND83 568 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 ASB17Q8WXJ9 295 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 BPIFA2Q96DR5 249 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 RAB3CQ96E17 227 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 DPH7Q9BTV6 452 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 BOCQ9BWV1 1114 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 OPA3Q9H6K4 179 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 CPNE7Q9UBL6 633 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 TESQ9UGI8 421 aaKnown RBP8.35□□□□□ -1.07
VCL-206ENST00000623461 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GPR137BO60478 399 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 Q6ZSR9 355 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 USP51Q70EK9 711 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 C2CD4CQ8TF44 421 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 RNF32Q9H0A6 362 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SCPEP1Q9HB40 452 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 SLC6A14Q9UN76 642 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 IER3IP1Q9Y5U9 82 aa8.35□□□□□ -1.07
VCL-206ENST00000623461 GFRA2O00451 464 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CPT2P23786 658 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 IMPA1P29218 277 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ACTR1BP42025 376 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 EVX1P49640 407 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms