RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 CCT8L1PA6NM43 557 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SHISA9B4DS77 424 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 RAD51DO75771 328 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 AK1P00568 194 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 CREB1P16220 341 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 CCNA2P20248 432 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SERPINB5P36952 375 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 CDH11P55287 796 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 EMX2Q04743 252 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 MAD2L1Q13257 205 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SKP2Q13309 424 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 MAPK14Q16539 360 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SYT14P1Q58G82 188 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 AGAP6Q5VW22 663 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SLC22A25Q6T423 547 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 DNAJC14Q6Y2X3 702 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 EIF3MQ7L2H7 374 aaKnown RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 C16orf62Q7Z3J2 963 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 HMGN2P46Q86SG4 172 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 MTDHQ86UE4 582 aaKnown RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 RIBC1Q8N443 379 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 ZNF433Q8N7K0 673 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 OR4A15Q8NGL6 344 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 RAB8BQ92930 207 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 RHNO1Q9BSD3 238 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 C1QTNF6Q9BXI9 259 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 NMUR2Q9GZQ4 415 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 SERHL2Q9H4I8 314 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 CTPS2Q9NRF8 586 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 ACER3Q9NUN7 267 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 FAIMQ9NVQ4 179 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 NPAP1Q9NZP6 1156 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 POU2F3Q9UKI9 436 aa8.23□□□□□ -1.09
TARDBP-227ENST00000622057 ANK3Q12955 4377 aaKnown RBP8.23□□□□□ -1.09
TARDBP-227ENST00000622057 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 OR5H1A6NKK0 313 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 E7EQL1 145 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 M0R1B8 84 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ETV2O00321 342 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 RNASET2O00584 256 aaKnown RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 TLX2O43763 284 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 CD5LO43866 347 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 GPRIN2O60269 458 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 MRPL33O75394 65 aaKnown RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 PGM3O95394 542 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 BPGMP07738 259 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 TTKP33981 857 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 PGM1P36871 562 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 APOBEC1P41238 236 aaKnown RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ZNF83P51522 516 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 NUDT6P53370 316 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 OR2B6P58173 313 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 RAB35Q15286 201 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 PDCD2Q16342 344 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 GPAT3Q53EU6 434 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ATAD3BQ5T9A4 648 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 FBXW9Q5XUX1 488 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 TNFAIP8L2Q6P589 184 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 PODNL1Q6PEZ8 512 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 TMEM108Q6UXF1 575 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 P2RY8Q86VZ1 359 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ANKRD46Q86W74 232 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 CCDC103Q8IW40 242 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 HTRA1Q92743 480 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 APH1AQ96BI3 265 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ZG16BQ96DA0 208 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ZHX1-C8orf76Q96EF9 292 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 RADILQ96JH8 1075 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ARL5BQ96KC2 179 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ADAD1Q96M93 576 aaKnown RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 DPY30Q9C005 99 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ZNF350Q9GZX5 532 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 NOP53Q9NZM5 478 aaKnown RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 EMC3Q9P0I2 261 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 CHRNA9Q9UGM1 479 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 WDR45Q9Y484 360 aa8.22□□□□□ -1.09
TARDBP-227ENST00000622057 SPIN1Q9Y657 262 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-227ENST00000622057 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.09
TARDBP-227ENST00000622057 IGHV4-30-2A0A087WSY4 118 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 FAM234BA2RU67 622 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 CLDN24A6NM45 220 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 ZNF716A6NP11 495 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 RNF212BA8MTL3 300 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 ITM2AO43736 263 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 DNAJA2O60884 412 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 BCAS1O75363 584 aaPredicted RBP8.21□□□□□ -1.1
TARDBP-227ENST00000622057 AGR2O95994 175 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 IFNA2P01563 188 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 COX5AP20674 150 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 UQCRC2P22695 453 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 PTAFRP25105 342 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 NTF4P34130 210 aa8.21□□□□□ -1.1
TARDBP-227ENST00000622057 MAGEA8P43361 318 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms