RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RFXANKO14593 260 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 AP3D1O14617 1153 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 PSMB1P20618 241 aaKnown RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 EDNRAP25101 427 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 HOXC12P31275 282 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 RASGEF1BQ0VAM2 473 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 MAPK11Q15759 364 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 GTDC1Q4AE62 458 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 SYT14P1Q58G82 188 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 SLC43A2Q8N370 569 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 ARFGAP2Q8N6H7 521 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 GLB1L3Q8NCI6 653 aaPredicted RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 OR9I1Q8NGQ6 314 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 PIWIL2Q8TC59 973 aaKnown RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 OIT3Q8WWZ8 545 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 S100PBPQ96BU1 408 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 TRNT1Q96Q11 434 aaKnown RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF300Q96RE9 604 aaPredicted RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 CCDC106Q9BWC9 280 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 BCO1Q9HAY6 547 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 GP6Q9HCN6 339 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 FANCFQ9NPI8 374 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 DLL4Q9NR61 685 aa15.25■□□□□ 0.03
HMGN3-203ENST00000620514 SETD2Q9BYW2 2564 aaPredicted RBP15.25■□□□□ 0.03
HMGN3-203ENST00000620514 AGAP5A6NIR3 686 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF814B7Z6K7 855 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 KLF11O14901 512 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 CYTIPO60759 359 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 PLAUP00749 431 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ADAP00813 363 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 IL6P05231 212 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 FESP07332 822 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 TFPIP10646 304 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 CCNA2P20248 432 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 DIO1P49895 249 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 MVDP53602 400 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 LRRC74AQ0VAA2 488 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 BEX5Q5H9J7 111 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 AGBL2Q5U5Z8 902 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ALKBH2Q6NS38 261 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 LRRC74BQ6ZQY2 392 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 TMPPEQ6ZT21 453 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ARL5BQ96KC2 179 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 EXOSC3Q9NQT5 275 aaKnown RBP15.24■□□□□ 0.03
HMGN3-203ENST00000620514 SDR39U1Q9NRG7 319 aaPredicted RBP15.24■□□□□ 0.03
HMGN3-203ENST00000620514 ZIM2Q9NZV7 527 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 KLHL9Q9P2J3 617 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 CHRNA9Q9UGM1 479 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 PRSS50Q9UI38 385 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 LIPT1Q9Y234 373 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
HMGN3-203ENST00000620514 SULT2B1O00204 365 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 UBDO15205 165 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 KRT75O95678 551 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 NR2F1P10589 423 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 ETFAP13804 333 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 RPS4Y1P22090 263 aaKnown RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 APOBEC1P41238 236 aaKnown RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 IDH2P48735 452 aaKnown RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 ANXA11P50995 505 aaKnown RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 NKX6-1P78426 367 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 TXNL4AP83876 142 aaKnown RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 GSTA3Q16772 222 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 SFRP5Q5T4F7 317 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 GRINAQ7Z429 371 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 ADGRG3Q86Y34 549 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 STEAP2Q8NFT2 490 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 WDR60Q8WVS4 1066 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 VPS33AQ96AX1 596 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 AURKBQ96GD4 344 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 PLPPR2Q96GM1 343 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 OR11A1Q9GZK7 315 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 OR10A4Q9H209 315 aa15.23■□□□□ 0.03
HMGN3-203ENST00000620514 GSX1Q9H4S2 264 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 RAI1Q7Z5J4 1906 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-203ENST00000620514 ROS1P08922 2347 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 SMPD2O60906 423 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 FPR1P21462 350 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 OR3A2P47893 321 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 POLR2JP52435 117 aaKnown RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 CSNK2A1P68400 391 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 EPGNQ6UW88 154 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF704Q6ZNC4 412 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 CMIPQ8IY22 773 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 CCL19Q99731 98 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 PIP5K1AQ99755 562 aa15.22■□□□□ 0.03
HMGN3-203ENST00000620514 TACO1Q9BSH4 297 aaKnown RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 MTHFD2LQ9H903 347 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 SPIN1Q9Y657 262 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 FLNAP21333 2647 aaKnown RBP15.22■□□□□ 0.03
HMGN3-203ENST00000620514 VPS13CQ709C8 3753 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 TMED7-TICAM2A0A0A6YYA0 188 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF724A8MTY0 619 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ANP32DO95626 131 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 ZCCHC18P0CG32 403 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 IL7RP16871 459 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 IL32P24001 234 aa15.21■□□□□ 0.03
HMGN3-203ENST00000620514 CRATP43155 626 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms