RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CNMDO75829 334 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF432O94892 652 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 GLRA1P23415 457 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 GALNSP34059 522 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 RAB11AP62491 216 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TRA2BP62995 288 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 UBAP2Q5T6F2 1119 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 PRAMEF20Q5VT98 475 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 KLHDC7AQ5VTJ3 777 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 CDHR3Q6ZTQ4 885 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SCML4Q8N228 414 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 VGLL2Q8N8G2 317 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 C1orf54Q8WWF1 131 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SEMA4DQ92854 862 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 KLHL31Q9H511 634 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 YJEFN3A6XGL0 299 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 AQP8O94778 261 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PVRP15151 417 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC2A5P22732 501 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 NXPH1P58417 271 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BNIP2Q12982 314 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BCL2L15Q5TBC7 163 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF276Q8N554 614 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 YIPF7Q8N8F6 280 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 COQ8AQ8NI60 647 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC25A40Q8TBP6 338 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF582Q96NG8 517 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 MIOXQ9UGB7 285 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TPRKBQ9Y3C4 175 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PCDHGA7Q9Y5G6 932 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PRAMEF11O60813 436 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 OLR1P78380 273 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PRTGQ2VWP7 1150 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF260Q3ZCT1 412 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SFRP1Q8N474 314 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF347Q96SE7 839 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SFXN3Q9BWM7 321 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 OSBPL7Q9BZF2 842 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF768Q9H5H4 540 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 TRAM1Q15629 374 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 FAM133BQ5BKY9 247 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 CUZD1Q86UP6 607 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ASB12Q8WXK4 309 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LPAR2Q9HBW0 351 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 KCMF1Q9P0J7 381 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LUZP4Q9P127 313 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 VPS29Q9UBQ0 182 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 MROH6A6NGR9 719 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 K7ESM1 405 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SERPINA5P05154 406 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BPGMP07738 259 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SEC11BP0C7V7 166 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 MPSTP25325 297 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 C2orf68Q2NKX9 166 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC6A19Q695T7 634 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 NAIF1Q69YI7 327 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 MKXQ8IYA7 352 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PSD4Q8NDX1 1056 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 NUDT10Q8NFP7 164 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 NUDT11Q96G61 164 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 OR52E6Q96RD3 313 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 COQ7Q99807 217 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC6A15Q9H2J7 730 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF442Q9H7R0 627 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PRDM7Q9NQW5 492 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PTTG3PQ9NZH4 202 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BOLA1Q9Y3E2 137 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 TCAF1Q9Y4C2 921 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC22A7Q9Y694 548 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 MBLAC1A4D2B0 266 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 SLC2A1P11166 492 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 MAGEA4P43358 317 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 GLYR1Q49A26 553 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 COQ5Q5HYK3 327 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 WBP1Q96G27 269 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 GPR22Q99680 433 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 RNF19AQ9NV58 838 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF701Q9NV72 531 aaPredicted RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 OR51F1A6NGY5 319 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ST6GAL1P15907 406 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 GNRHRP30968 328 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PBX1P40424 430 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 NDUFA5Q16718 116 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 VWA1Q6PCB0 445 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 MCATQ8IVS2 390 aaKnown RBP3.11□□□□□ -1.91
LPP-220ENST00000617246 LRRC34Q8IZ02 419 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SPAG16Q8N0X2 631 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PBOV1Q9GZY1 135 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 SMOC1Q9H4F8 434 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ZNF358Q9NW07 568 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 COMMD3Q9UBI1 195 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 OR14J1Q9UGF5 321 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 PGRMC2O15173 223 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BCHEP06276 602 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 ETFAP13804 333 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 LIFP15018 202 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 CD36P16671 472 aa3.11□□□□□ -1.91
LPP-220ENST00000617246 BCKDHBP21953 392 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms