RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 INSRP06213 1382 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRPPRCP42704 1394 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 KIAA1210Q9ULL0 1709 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SALL1Q9NSC2 1324 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 A0A0J9YVX5 310 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 A0A0J9YWU9 116 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TEX13DA0A0J9YY54 714 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 A0A1B0GTI1 187 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 KBTBD11-OT1A0A1B0GTJ5 212 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PRSS51A0A1B0GVH4 220 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 A0A1W2PRD5 423 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MED19A0JLT2 244 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 FEZF1A0PJY2 475 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 HYKKA2RU49 373 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MEIOCA2RUB1 952 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRRC30A6NM36 301 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CCT8L1PA6NM43 557 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PRR32B1ATL7 298 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 C17orf105B2RV13 164 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 E5RGE8 158 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 E5RI56 91 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRRN3E7EW58 273 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TEX46H3BTG2 121 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 M0R3G1 203 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 BTN3A3O00478 584 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TRAFD1O14545 582 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GPR171O14626 319 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 HAT1O14929 419 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 RAB29O14966 203 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 EIF3HO15372 352 aaKnown RBP eCLIP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CLOCKO15516 846 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 NDUFS6O75380 124 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SEMA3DO95025 777 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRATO95237 230 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 NADKO95544 446 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ETHE1O95571 254 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 RAB3DO95716 219 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 EDN1P05305 212 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 KRT16P08779 473 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 STSP08842 583 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC35G4P0C7Q5 338 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PET100P0DJ07 73 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MYL2P10916 166 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ETS2P15036 469 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GOT1P17174 413 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TSPAN8P19075 237 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 RAB4AP20338 218 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PMCHP20382 165 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SYT1P21579 422 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 UGT1A4P22310 534 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CA4P22748 312 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GIFP27352 417 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CD82P27701 267 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SFTPDP35247 375 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CYLC1P35663 651 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 RPL13AP40429 203 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MNDAP41218 407 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 NPY2RP49146 381 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 STK19P49842 368 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PDX1P52945 283 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ATP1B3P54709 279 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 AP3S2P59780 193 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PLP1P60201 277 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 VSNL1P62760 191 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 KCNJ2P63252 427 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 PITPNAQ00169 270 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CDKL1Q00532 357 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZFP36L1Q07352 338 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SCRN3Q0VDG4 424 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MSLNQ13421 630 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GRB7Q14451 532 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 FASTKD3Q14CZ7 662 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SPHARQ15513 63 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 QRICH1Q2TAL8 776 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GTDC1Q4AE62 458 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 VPS26BQ4G0F5 336 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 C5orf47Q569G3 176 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 SFT2D3Q587I9 215 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF691Q5VV52 312 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 KHDRBS2Q5VWX1 349 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LIPNQ5VXI9 398 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LIPJQ5W064 366 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR52W1Q6IF63 320 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF770Q6IQ21 691 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LINGO4Q6UY18 593 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 G2E3Q7L622 706 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MRPL21Q7Z2W9 205 aaKnown RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 FAM122BQ7Z309 247 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 ABHD12BQ7Z5M8 362 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TMPRSS11BQ86T26 416 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 MOB3BQ86TA1 216 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 GTSCR1Q86UQ5 136 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 TMEM17Q86X19 198 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CRLF3Q8IUI8 442 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 CMTM8Q8IZV2 173 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 LIX1Q8N485 282 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 THAP8Q8NA92 274 aa2.26□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR4D5Q8NGN0 318 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 255.2 ms