RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 A0A1B0GWA3 101 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 VSTM2BA6NLU5 285 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 UPK1AO00322 258 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 MAGEB4O15481 346 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SOX18P35713 384 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CASRP41180 1078 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC1A3P43003 542 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 LRRC37A5PQ49AS3 106 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PTCRAQ6ISU1 281 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PAQR7Q86WK9 346 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PCYT1BQ9Y5K3 369 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 A0A1W2PS29 197 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 K7EQS6 105 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SUSD5O60279 629 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 GREM1O60565 184 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 JUNBP17275 347 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TACR3P29371 465 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PRKAR1BP31321 381 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 EIF2DP41214 584 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CXCL12P48061 93 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PPP1CAP62136 330 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TFF2Q03403 129 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TLE3Q04726 772 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 AQP6Q13520 282 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 ARFRP1Q13795 201 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SERTAD2Q14140 314 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 WBP2NLQ6ICG8 309 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TDHQ8IZJ6 230 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 RBP7Q96R05 134 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 KLHL9Q9P2J3 617 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC17A4Q9Y2C5 497 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PDE4DIPQ5VU43 2346 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 A0A1W2PQ09 198 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SERINC4A6NH21 518 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CLDN12P56749 244 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 STEAP3Q658P3 488 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 QSOX2Q6ZRP7 698 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CASTOR1Q8WTX7 329 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 DNAJA4Q8WW22 397 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM41AQ96HV5 264 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PIGUQ9H490 435 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 NT5DC2Q9H857 520 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 NUFIP1Q9UHK0 495 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 GPR55Q9Y2T6 319 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 HS3ST3A1Q9Y663 406 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 LYRM1O43325 122 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF749O43361 778 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 PNMTP11086 282 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 PITPNBP48739 271 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 RAB15P59190 212 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 GMFBP60983 142 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 CNRIP1Q96F85 164 aaPredicted RBP8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 KATNB1Q9BVA0 655 aa8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 PTRH2Q9Y3E5 179 aaKnown RBP8.27□□□□□ -1.08
PDLIM5-222ENST00000615540 DRD3P35462 400 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PRKCDQ05655 676 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 TDGQ13569 410 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ARHGAP11BQ3KRB8 267 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 TSSK4Q6SA08 328 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC35D2Q76EJ3 337 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC6A7Q99884 636 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ULBP3Q9BZM4 244 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 HSPB11Q9Y547 144 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PATJQ8NI35 1801 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SHC1P29353 583 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC35A2P78381 396 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SNTA1Q13424 505 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT14P1Q58G82 188 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PRAMEF8Q5VWM4 474 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PRAMEF7Q5VXH5 474 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLX4IPQ5VYV7 408 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 UEVLDQ8IX04 471 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF595Q8IYB9 648 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM99Q8N816 258 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 BCORP1Q8N888 145 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC22A8Q8TCC7 542 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 MMP17Q9ULZ9 603 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC35A3Q9Y2D2 325 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 CCL27Q9Y4X3 112 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SBF1O95248 1867 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 KDM4EB2RXH2 506 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SCRG1O75711 98 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 GABARAPO95166 117 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PAPLNO95428 1278 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 RPS19P39019 145 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 S100A10P60903 97 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 RAB11BQ15907 218 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 NDUFA5Q16718 116 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT6Q5T7P8 510 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 FAHD1Q6P587 224 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 NCCRP1Q6ZVX7 275 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 TIGD4Q8IY51 512 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ALDH16A1Q8IZ83 802 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms