RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ADAMDEC1O15204 470 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RCBTB2O95199 551 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 PLAUP00749 431 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 GABRA1P14867 456 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 OR1E2P47887 323 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 STX1BP61266 288 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NFYCQ13952 458 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 GUSBP1Q15486 140 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NPTX1Q15818 432 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF239Q16600 458 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 REP15Q6BDI9 236 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 GDF7Q7Z4P5 450 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ACBD4Q8NC06 268 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 HTRA1Q92743 480 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 KLHL15Q96M94 604 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 TRNT1Q96Q11 434 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CGREF1Q99674 301 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 EXD2Q9NVH0 621 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF443Q9Y2A4 671 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 DUXAA6NLW8 204 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CDK2AP1O14519 115 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 SNUPNO95149 360 aaKnown RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 COX6B1P14854 86 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 FUT1P19526 365 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CTSSP25774 331 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 DIO1P49895 249 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 CARD18P57730 90 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RAC1P63000 192 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 MYBPHQ13203 477 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ATAD3BQ5T9A4 648 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 RIPPLY2Q5TAB7 128 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 P4HA3Q7Z4N8 544 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 METTL25Q8N6Q8 603 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 MOAP1Q96BY2 351 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 KTI12Q96EK9 354 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-208ENST00000614678 SDHAF3Q9NRP4 125 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 ADPRHL2Q9NX46 363 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 JKAMPQ9P055 326 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 NDUFAF1Q9Y375 327 aa5.08□□□□□ -1.6
CPNE3-208ENST00000614678 SONP18583 2426 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 DNAJA2O60884 412 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 AKR7A3O95154 331 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 IFI6P09912 130 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 TFPIP10646 304 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 NCK1P16333 377 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 FPR1P21462 350 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 DRD4P21917 467 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 YAP1P46937 504 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 LRRC74AQ0VAA2 488 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF311Q5JNZ3 666 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 LRRC74BQ6ZQY2 392 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 EIF3MQ7L2H7 374 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 OR2V1Q8NHB1 315 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 VANGL1Q8TAA9 524 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 WDR60Q8WVS4 1066 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 NEUROG1Q92886 237 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 TAMM41Q96BW9 452 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 LAT2Q9GZY6 243 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 KAT8Q9H7Z6 458 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 KLF2Q9Y5W3 355 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 HEATR1Q9H583 2144 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 M0QX08 132 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 AIM2O14862 343 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 FESP07332 822 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 PABPC4LP0CB38 370 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 ZCCHC18P0CG32 403 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 GPX2P18283 190 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 LSP1P33241 339 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 CLK3P49761 638 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 CDK6Q00534 326 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 EPS8Q12929 822 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 SYT14P1Q58G82 188 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 BHLHB9Q6PI77 547 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 TMEM99Q8N816 258 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 WNT2BQ93097 391 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 PSD2Q9BQI7 771 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 RBM24Q9BX46 236 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 C1QTNF6Q9BXI9 259 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 KLHL4Q9C0H6 718 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 CMTM6Q9NX76 183 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 P2RX2Q9UBL9 471 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 SOX30O94993 753 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 THBDP07204 575 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 HOXD4P09016 255 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 HLA-DOBP13765 273 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 AGTR1P30556 359 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 KCNJ5P48544 419 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 GNGT1P63211 74 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 HPCAP84074 193 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 LTBQ06643 244 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 CBFBQ13951 182 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 SCARB2Q14108 478 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 TMEM211Q6ICI0 200 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 PM20D2Q8IYS1 436 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 TRIML2Q8N7C3 387 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 OR6T1Q8NGN1 323 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF837Q96EG3 531 aaPredicted RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF583Q96ND8 569 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms