RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ATP6V1C2Q8NEY4 427 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 DMRTA2Q96SC8 542 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 NPAS1Q99742 590 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 TUBA1CQ9BQE3 449 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 TMEM27Q9HBJ8 222 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 EGFL7Q9UHF1 273 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 MAGEL2Q9UJ55 1249 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 ERRFI1Q9UJM3 462 aaPredicted RBP11.95□□□□□ -0.5
MDC1-209ENST00000613547 RPS6KA6Q9UK32 745 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 PRPF19Q9UMS4 504 aaKnown RBP11.95□□□□□ -0.5
MDC1-209ENST00000613547 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
MDC1-209ENST00000613547 SPENQ96T58 3664 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 TMED7-TICAM2A0A0A6YYA0 188 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 CLCA1A8K7I4 914 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ADAMDEC1O15204 470 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GYG2O15488 501 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 FMO6PO60774 539 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ATP5HO75947 161 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 SYNGR4O95473 234 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ZNF682O95780 498 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 FCGR2AP12318 317 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 EIF1AXP47813 144 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 CLK1P49759 484 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 ZNF136P52737 540 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 SUCLG1P53597 346 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 SELENOWP63302 87 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 CBX1P83916 185 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 HOXC5Q00444 222 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 BNIP2Q12982 314 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 NRF1Q16656 503 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 TMEM176BQ3YBM2 270 aaPredicted RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 NSUN5P2Q63ZY6 315 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 HBMQ6B0K9 141 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GLYATQ6IB77 296 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GGNQ86UU5 652 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 LSMEM1Q8N8F7 131 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GPR32P1Q8NGA4 272 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 OR10Q1Q8NGQ4 319 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 VANGL1Q8TAA9 524 aaPredicted RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 DNAJA4Q8WW22 397 aaPredicted RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 RND1Q92730 232 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 DDIT4LQ96D03 193 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ARHGDIGQ99819 225 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 TTYH2Q9BSA4 534 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ADAM19Q9H013 955 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 TAS2R1Q9NYW7 299 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 COQ3Q9NZJ6 369 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 FAM215AQ9Y5M1 114 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 SNX13Q9Y5W8 968 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
MDC1-209ENST00000613547 GCN1Q92616 2671 aaKnown RBP11.94□□□□□ -0.5
MDC1-209ENST00000613547 SLC22A20A6NK97 555 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 H0YC42 278 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 M0R3H8 397 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 ZNF208O43345 1280 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 EFNA2O43921 213 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SEMA7AO75326 666 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 STAMBPO95630 424 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SERPINA1P01009 418 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 IL2RAP01589 272 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 OPN1LWP04000 364 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 PNMTP11086 282 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 NCK1P16333 377 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 IL11P20809 199 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 IFNA8P32881 189 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 CRYBA2P53672 197 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 TPD52P55327 224 aaPredicted RBP11.93□□□□□ -0.5
MDC1-209ENST00000613547 CARD18P57730 90 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 PMPCAQ10713 525 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 CEACAM7Q14002 265 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
MDC1-209ENST00000613547 RTL6Q6ICC9 239 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 PPP4R4Q6NUP7 873 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 ULK3Q6PHR2 472 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 FKBP9P1Q75LS8 142 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 P4HA3Q7Z4N8 544 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 COMTD1Q86VU5 262 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 CARM1Q86X55 608 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 ADGRG3Q86Y34 549 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 FAM156AQ8NDB6 213 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 OR10D3Q8NH80 312 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 RNF217Q8TC41 542 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SSC4DQ8WTU2 575 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 WNT2BQ93097 391 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 C3orf49Q96BT1 292 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 ZNF524Q96C55 264 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 SLC47A1Q96FL8 570 aa11.93□□□□□ -0.5
MDC1-209ENST00000613547 CCDC120Q96HB5 630 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms