RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GATBO75879 557 aaKnown RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 CTSBP07858 339 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 AHCYP23526 432 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 STOMP27105 288 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SOX2P48431 317 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 RUNX3Q13761 415 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 PARGQ86W56 976 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 PLA2G2FQ9BZM2 168 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 ASB6Q9NWX5 421 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 OR6C2Q9NZP2 312 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SPATA2Q9UM82 520 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 ING4Q9UNL4 249 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 PPIEQ9UNP9 301 aaKnown RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 EXOGQ9Y2C4 368 aaKnown RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 I3L521 148 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 PPP1CAP62136 330 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 FAAH2Q6GMR7 532 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 GJD3Q8N144 294 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 METTL27Q8N6F8 245 aaPredicted RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 C10orf53Q8N6V4 93 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 TSSK2Q96PF2 358 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 HDAC8Q9BY41 377 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 OR10A4Q9H209 315 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 NT5DC2Q9H857 520 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 BHLHE40O14503 412 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 SEC14L5O43304 696 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 RNGTTO60942 597 aaKnown RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 STX11O75558 287 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 TYRP1P17643 537 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 ENPP1P22413 925 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 F8A1P23610 371 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 GDI1P31150 447 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 TLX1P31314 330 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 CCR4P51679 360 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 OC90Q02509 493 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 SNTB2Q13425 540 aaKnown RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 GALEQ14376 348 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 BICRALQ6AI39 1079 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 POMZP3Q6PJE2 187 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 MRGPREQ86SM8 312 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 GID4Q8IVV7 300 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 GIMAP1Q8WWP7 306 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 THAP4Q8WY91 577 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 KISS1RQ969F8 398 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-207ENST00000612273 C10orf90Q96M02 699 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 APOOQ9BUR5 198 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 OR51J1Q9H342 316 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 DPAGT1Q9H3H5 408 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 KCMF1Q9P0J7 381 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 IER3IP1Q9Y5U9 82 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 SGK494L7N484 410 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 B3GALT2O43825 422 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 EDNRAP25101 427 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 THBS2P35442 1172 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 MTNR1BP49286 362 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF85Q03923 595 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 C9orf62Q8N4C0 152 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 CEP76Q8TAP6 659 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 ZNRF4Q8WWF5 429 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 OR1E3Q8WZA6 343 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 RAB7BQ96AH8 199 aa12.99□□□□□ -0.33
COL6A1-207ENST00000612273 TRBV2A0A0J9YWF9 115 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 LINC01553A4QN01 128 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 WNT1P04628 370 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 NDUFS1P28331 727 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 BTCP35070 178 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 PGDP52209 483 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 PLA1AQ53H76 456 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 DGAT2L6Q6ZPD8 337 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 LUZP2Q86TE4 346 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF527Q8NB42 609 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 MFSD9Q8NBP5 474 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 CREB3L1Q96BA8 519 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 HYLS1Q96M11 299 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 NMNAT3Q96T66 252 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 KRCC1Q9NPI7 259 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 THAP10Q9P2Z0 257 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SIGLEC7Q9Y286 467 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 HRKO00198 91 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SMAD9O15198 467 aaKnown RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 KLF4O43474 513 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 OR10H2O60403 315 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SELENOFO60613 162 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 HPXP02790 462 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 HIST1H1CP16403 213 aaKnown RBP12.98□□□□□ -0.33
COL6A1-207ENST00000612273 TNFRSF17Q02223 184 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 SMUG1Q53HV7 270 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 FAM109AQ8N4B1 249 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 GALNT6Q8NCL4 622 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 FOXN4Q96NZ1 517 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 NIPAL2Q9H841 368 aa12.98□□□□□ -0.33
COL6A1-207ENST00000612273 ERVMER34-1Q9H9K5 563 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms