RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PJVKQ0ZLH3 352 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 PLD1Q13393 1074 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 DDX39BQ13838 428 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 LAGE3Q14657 143 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 NDUFA9Q16795 377 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC36A3Q495N2 470 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 FHL5Q5TD97 284 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 MOB1BQ7L9L4 216 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 CD302Q8IX05 232 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 UBQLNLQ8IYU4 475 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 RAET1EQ8TD07 263 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 ACMSDQ8TDX5 336 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 AENQ8WTP8 325 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 ANKRD7Q92527 254 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 BADQ92934 168 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 LRRC45Q96CN5 670 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC25A38Q96DW6 304 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 ARL5BQ96KC2 179 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 C7orf34Q96L11 122 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 NOL4LQ96MY1 436 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 MRPL37Q9BZE1 423 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 GPR61Q9BZJ8 451 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 RAB33BQ9H082 229 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 PAK1IP1Q9NWT1 392 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 GSTK1Q9Y2Q3 226 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 OARD1Q9Y530 152 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 USP16Q9Y5T5 823 aa3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 CFAP65Q6ZU64 1925 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-213ENST00000609587 TRAV6A0A075B6T7 132 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SERTM2A0A1B0GWG4 89 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OR6C74A6NCV1 312 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF716A6NP11 495 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 B4DXG7 233 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 H3BMQ9 156 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 K7ENP7 123 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OR1F1O43749 312 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SERF1AO75920 110 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 NEBLO76041 1014 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 TM7SF2O76062 418 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SMC2O95347 1197 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 LY6G6DO95868 133 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 STSP08842 583 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF735P0CB33 412 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 UBTFL6P0CB48 400 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF24P17028 368 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF3P17036 446 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ATP6V1C1P21283 382 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 TBXA2RP21731 343 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ZBTB25P24278 435 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OR3A4PP47883 348 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 STARP49675 285 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 EFNA3P52797 238 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 PLA2G16P53816 162 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 PLTPP55058 493 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 MRPS11P82912 194 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OTUD4Q01804 1114 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 EWSR1Q01844 656 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SPIBQ01892 262 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CNTN2Q02246 1040 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 BCL2L1Q07817 233 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 RIPPLY1Q0D2K3 151 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 PRR4Q16378 134 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 TATDN3Q17R31 274 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC152Q4G0S7 254 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 LRRC23Q53EV4 343 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OR2B11Q5JQS5 317 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 RABGAP1LQ5R372 815 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 FAHD2BQ6P2I3 314 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CES3Q6UWW8 571 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 KIAA1328Q86T90 577 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 KRT222Q8N1A0 295 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 EIF1ADQ8N9N8 165 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 PNPT1Q8TCS8 783 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SPRYD4Q8WW59 207 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OSTF1Q92882 214 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 FAHD2AQ96GK7 314 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CATSPER2Q96P56 530 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SECISBP2Q96T21 854 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC6A7Q99884 636 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SH3GL1Q99961 368 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 Q9H3A6 140 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 LRRC40Q9H9A6 602 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 MEAF6Q9HAF1 191 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 UBAP1Q9NZ09 502 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 SPATA7Q9P0W8 599 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CHRNA9Q9UGM1 479 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 CA5BQ9Y2D0 317 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 C15orf41Q9Y2V0 281 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 OR10H1Q9Y4A9 318 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 PHLPP2Q6ZVD8 1323 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ABCA7Q8IZY2 2146 aa3.11□□□□□ -1.91
SMCHD1-213ENST00000609587 ATP10DQ9P241 1426 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 IGKV6D-41A0A0C4DH26 115 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 A0A0U1RQS6 177 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms