RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ACTRT3Q9BYD9 372 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 QRSL1Q9H0R6 528 aaKnown RBP15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 H6PDO95479 791 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 WNT11O96014 354 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 ERCC1P07992 297 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 ZNF23P17027 643 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 ITGA2P17301 1181 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 HPCAL1P37235 193 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 FRKP42685 505 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 MAGEA8P43361 318 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 ASMTP46597 345 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 SYT14P1Q58G82 188 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 C9orf135Q5VTT2 229 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 CASP12Q6UXS9 341 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 TIFABQ6ZNK6 161 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 MEX3DQ86XN8 651 aaKnown RBP15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 C17orf78Q8N4C9 275 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 OR56A1Q8NGH5 318 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 MTERF3Q96E29 417 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 HEATR1Q9H583 2144 aaKnown RBP15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 PARPBPQ9NWS1 579 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 DCDC2Q9UHG0 476 aa15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 TMEFF2Q9UIK5 374 aaPredicted RBP15.21■□□□□ 0.03
CHMP4A-211ENST00000609024 IGKV3D-15A0A087WSY6 115 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 IGHV4-61A0A0C4DH41 118 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 ATP6V1G2-DDX39BF2Z307 99 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 SNUPNO95149 360 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 CHEK2O96017 543 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 NEFHP12036 1026 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 SDC1P18827 310 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 PGCP20142 388 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 PRPH2P23942 346 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 RPL3P39023 403 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 CCT3P49368 545 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 PRPS1P60891 318 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 RPL38P63173 70 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 KIAA0040Q15053 153 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 ABLIM2Q6H8Q1 611 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 ZNF563Q8TA94 476 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 SORCS2Q96PQ0 1159 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 OCEL1Q9H607 264 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 MALT1Q9UDY8 824 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 BAIAP2L1Q9UHR4 511 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 MOKQ9UQ07 419 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 FIS1Q9Y3D6 152 aa15.2■□□□□ 0.02
CHMP4A-211ENST00000609024 SERINC4A6NH21 518 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 PCMT1P22061 227 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 CFPP27918 469 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 CHN2P52757 468 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 SESN3P58005 492 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 PDE7AQ13946 482 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 GPR68Q15743 365 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 GALNTL6Q49A17 601 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 PDZK1Q5T2W1 519 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 C1QTNF12Q5T7M4 302 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 CLEC6AQ6EIG7 209 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 BHLHB9Q6PI77 547 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 SPATA19Q7Z5L4 167 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 C1orf162Q8NEQ5 155 aaPredicted RBP15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 ACMSDQ8TDX5 336 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 BPESC1Q9GZL8 116 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 LAT2Q9GZY6 243 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 RAB1BQ9H0U4 201 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 METRNQ9UJH8 293 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 TMED5Q9Y3A6 229 aa15.19■□□□□ 0.02
CHMP4A-211ENST00000609024 TMEM114B3SHH9 223 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 CFLARO15519 480 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 CSTAP01040 98 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 FKBP2P26885 142 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 SERPINF1P36955 418 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 APOBEC1P41238 236 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 SWI5Q1ZZU3 235 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 LSM12Q3MHD2 195 aaKnown RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 UGT2A3Q6UWM9 527 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 ZYG11AQ6WRX3 759 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 FRMD7Q6ZUT3 714 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 ANKS4BQ8N8V4 417 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 CCDC63Q8NA47 563 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 OR52E4Q8NGH9 312 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 ZMYND19Q96E35 227 aaPredicted RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 C1orf159Q96HA4 380 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 BHLHE41Q9C0J9 482 aaPredicted RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 SLC17A5Q9NRA2 495 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 SIRT3Q9NTG7 399 aaPredicted RBP15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 ATAD3AQ9NVI7 634 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 DCTN4Q9UJW0 460 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 SLC9A8Q9Y2E8 581 aa15.18■□□□□ 0.02
CHMP4A-211ENST00000609024 ZNF716A6NP11 495 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 VSTM5A8MXK1 200 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 B9A039 149 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 ETV2O00321 342 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 ANKRD28O15084 1053 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 DNPH1O43598 174 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 PMS2P2O95744 297 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 ITGA5P08648 1049 aa15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 UBTFL6P0CB48 400 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 CDH2P19022 906 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-211ENST00000609024 MAPK1P28482 360 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms