RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ZCCHC18P0CG32 403 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 FAM157CP0CG43 387 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 NR2F1P10589 423 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 CRATP43155 626 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 RAC1P63000 192 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 CBFBQ13951 182 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 PON3Q15166 354 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 TOMM34Q15785 309 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-208ENST00000608287 CLEC12BQ2HXU8 276 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 GTDC1Q4AE62 458 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 SLC2A7Q6PXP3 512 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 FBXO27Q8NI29 283 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 GTF2H4Q92759 462 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 ZG16BQ96DA0 208 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 TRMT61AQ96FX7 289 aaKnown RBP17.17■□□□□ 0.34
SGMS1-208ENST00000608287 TRNT1Q96Q11 434 aaKnown RBP17.17■□□□□ 0.34
SGMS1-208ENST00000608287 LAT2Q9GZY6 243 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 TPT1P8Q9HAU6 139 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 NPHS2Q9NP85 383 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 DCTN4Q9UJW0 460 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 CDC42EP3Q9UKI2 254 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 ZNF175Q9Y473 711 aa17.17■□□□□ 0.34
SGMS1-208ENST00000608287 GPC6Q9Y625 555 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-208ENST00000608287 RNF223E7ERA6 249 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 C16orf97H3BN30 126 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
SGMS1-208ENST00000608287 ETFAP13804 333 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 NID1P14543 1247 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 POU2F1P14859 743 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 IL11P20809 199 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 NR1H2P55055 460 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 FAM27E3Q08E93 113 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 SKP2Q13309 424 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 FGFBP1Q14512 234 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 LRRC74BQ6ZQY2 392 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 FUNDC1Q8IVP5 155 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 LILRA2Q8N149 483 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 FNDC9Q8TBE3 224 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 OIT3Q8WWZ8 545 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 SPDL1Q96EA4 605 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 AURKBQ96GD4 344 aaPredicted RBP17.16■□□□□ 0.34
SGMS1-208ENST00000608287 THUMPD3Q9BV44 507 aaKnown RBP17.16■□□□□ 0.34
SGMS1-208ENST00000608287 PRRG4Q9BZD6 226 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 QRSL1Q9H0R6 528 aaKnown RBP17.16■□□□□ 0.34
SGMS1-208ENST00000608287 SLC38A1Q9H2H9 487 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 SLC35A3Q9Y2D2 325 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 USF3Q68DE3 2245 aa17.16■□□□□ 0.34
SGMS1-208ENST00000608287 A0A1W2PNV4 684 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 A8MV72 311 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 TNFSF11O14788 317 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 CHRM4P08173 479 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 PRKCAP17252 672 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 NCF2P19878 526 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ELK4P28324 431 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ADH6P28332 368 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 SFTPDP35247 375 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 IDUAP35475 653 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 UGT2B10P36537 528 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 MAGEA8P43361 318 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 KCNJ5P48544 419 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ATP4BP51164 291 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 MVDP53602 400 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 IRX1P78414 480 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 SQLEQ14534 574 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 QPRTQ15274 297 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 AGKQ53H12 422 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 HSP90B2PQ58FF3 399 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 BEX5Q5H9J7 111 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 PDSS1Q5T2R2 415 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 AP1ARQ63HQ0 302 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 BLOC1S3Q6QNY0 202 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ESPNLQ6ZVH7 1005 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 CNEP1R1Q8N9A8 125 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ATP6V1C2Q8NEY4 427 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 OR10D3Q8NH80 312 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 OR2V1Q8NHB1 315 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 IGFBPL1Q8WX77 278 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 MRGPRX4Q96LA9 322 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 KLHL15Q96M94 604 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 REG4Q9BYZ8 158 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 PAIP1Q9H074 479 aaKnown RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 PAQR5Q9NXK6 330 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-208ENST00000608287 P2RX2Q9UBL9 471 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 PCDHB14Q9Y5E9 798 aa17.15■□□□□ 0.34
SGMS1-208ENST00000608287 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 A0A0G2JND7 137 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 A0A0J9YW62 118 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 CXCL13O43927 109 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 TNFSF13O75888 250 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 FCGR2AP12318 317 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 PPP3CBP16298 524 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 PGCP20142 388 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 PGM1P36871 562 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 DSTNP60981 165 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 RPS4XP62701 263 aaKnown RBP17.14■□□□□ 0.33
SGMS1-208ENST00000608287 SIRPAP78324 504 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 KCNJ10P78508 379 aa17.14■□□□□ 0.33
SGMS1-208ENST00000608287 CTU2Q2VPK5 515 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms