RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NANOGNBQ7Z5D8 188 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 AKAP1Q92667 903 aaKnown RBP eCLIP18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 GABRG3Q99928 467 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF559Q9BR84 538 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 GON7Q9BXV9 100 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A0B4J203 849 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 DRD5P21918 477 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 BTCP35070 178 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 TFF2Q03403 129 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 FHL1Q13642 323 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 BTBD16Q32M84 506 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 BCL2L15Q5TBC7 163 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 SDE2Q6IQ49 451 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 TPRA1Q86W33 373 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 OR51L1Q8NGJ5 315 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 MCCC2Q9HCC0 563 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 PRDM9Q9NQV7 894 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 SPACA6W5XKT8 324 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A0A6YYJ9 748 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 GNB5O14775 395 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 LINC01565O15544 149 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CHP2O43745 196 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 FZD7O75084 574 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 ALX3O95076 343 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 KLF8O95600 359 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 PEPDP12955 493 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CD53P19397 219 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 AHCYP23526 432 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TAS2R43P59537 309 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 SRSF5Q13243 272 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 MAB21L1Q13394 359 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TP53I3Q53FA7 332 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 RNASE12Q5GAN4 147 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 DMKNQ6E0U4 476 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 FBXO46Q6PJ61 603 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 BMPERQ8N8U9 685 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 OR4N2Q8NGD1 307 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 OR52R1Q8NGF1 315 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 OR5H6Q8NGV6 325 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 DEDD2Q8WXF8 326 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 ZMYND19Q96E35 227 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 SIPA1Q96FS4 1042 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TWSG1Q9GZX9 223 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CCDC86Q9H6F5 360 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 KNL1Q8NG31 2342 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TRAV6A0A075B6T7 132 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 HCRTR1O43613 425 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CBX7O95931 251 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 HOXC4P09017 264 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 HK1P19367 917 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TRAM1Q15629 374 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 LAMTOR1Q6IAA8 161 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 ANKRD54Q6NXT1 300 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 ZCCHC12Q6PEW1 402 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CA13Q8N1Q1 262 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 GHDCQ8N2G8 530 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 SDR9C7Q8NEX9 313 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 HSD17B8Q92506 261 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CTHRC1Q96CG8 243 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 CACNG2Q9Y698 323 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 TICRRQ7Z2Z1 1910 aa18.65■□□□□ 0.58
SHKBP1-225ENST00000600733 ERVH48-1M5A8F1 160 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 SOX30O94993 753 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 HTR2BP41595 481 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 PPP1CAP62136 330 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 GPLD1P80108 840 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 CRYZQ08257 329 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 RTL4Q6ZR62 310 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 PLCZ1Q86YW0 608 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 C7orf61Q8IZ16 206 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 OR4D9Q8NGE8 314 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 OR52E2Q8NGJ4 325 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 OR4K13Q8NH42 304 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 BAHD1Q8TBE0 780 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 ELSPBP1Q96BH3 223 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 ANKRD9Q96BM1 317 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 RBCK1Q9BYM8 510 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 C14orf105Q9NVL8 296 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 ST6GALNAC2Q9UJ37 374 aa18.64■□□□□ 0.57
SHKBP1-225ENST00000600733 GALR3O60755 368 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 AK1P00568 194 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 TFP02787 698 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 RAB3BP20337 219 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 ACAA2P42765 397 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 NRG3P56975 720 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 SRP54P61011 504 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 NTRK2Q16620 822 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 ALG11Q2TAA5 492 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 ALG10BQ5I7T1 473 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 ERMAPQ96PL5 475 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 GTPBP2Q9BX10 602 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 FOLH1BQ9HBA9 442 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 NUDT15Q9NV35 164 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 HAO2Q9NYQ3 351 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 HSPB11Q9Y547 144 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 ARHGEF9O43307 516 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 OR2B3O76000 313 aa18.63■□□□□ 0.57
SHKBP1-225ENST00000600733 NKX2-2O95096 273 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms