RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SERHL2Q9H4I8 314 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 GRPEL1Q9HAV7 217 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 ACER3Q9NUN7 267 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 MALT1Q9UDY8 824 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 DCDC2Q9UHG0 476 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 PKD1L1Q8TDX9 2849 aa5.35□□□□□ -1.55
VRK3-220ENST00000600259 LOC100289279A0A1B0GTE1 492 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 EXOC1LA0A1B0GW35 172 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 CIB4A0PJX0 185 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 SERINC4A6NH21 518 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 GTPBP1O00178 669 aaKnown RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 NDUFS8O00217 210 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ZNF264O43296 627 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 PLIN3O60664 434 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 FCMRO60667 390 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 BCAS1O75363 584 aaPredicted RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 NUDT14O95848 222 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 FGF4P08620 206 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 IGFBP1P08833 259 aaPredicted RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 CSF3P09919 207 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 LINC00032P0C843 101 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 SLC7A1P30825 629 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 NAA20P61599 178 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 CHRNEQ04844 493 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 RUNX1T1Q06455 604 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 MAPK14Q16539 360 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 FAM166AQ6J272 317 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 OLIG3Q7RTU3 272 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ADGRG3Q86Y34 549 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 CCDC103Q8IW40 242 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 RIMKLAQ8IXN7 391 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ZIC4Q8N9L1 334 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 FAM71CQ8NEG0 241 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 OR52E4Q8NGH9 312 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 IFT81Q8WYA0 676 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 OR5P2Q8WZ92 322 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ST8SIA1Q92185 356 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 CCDC126Q96EE4 140 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 SORCS2Q96PQ0 1159 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 OR7D2Q96RA2 312 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 CCDC106Q9BWC9 280 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 GATA5Q9BWX5 397 aaPredicted RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 BHLHE41Q9C0J9 482 aaPredicted RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 NMUR2Q9GZQ4 415 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 IQCGQ9H095 443 aaKnown RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 EML4Q9HC35 981 aaKnown RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 SLC17A5Q9NRA2 495 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 SLC7A10Q9NS82 523 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 ZCCHC3Q9NUD5 404 aaKnown RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 ASB6Q9NWX5 421 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 TAS2R16Q9NYV7 291 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 KCNS2Q9ULS6 477 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 NOSIPQ9Y314 301 aaKnown RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 DNAJC15Q9Y5T4 150 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
VRK3-220ENST00000600259 NUP214P35658 2090 aaPredicted RBP5.34□□□□□ -1.55
VRK3-220ENST00000600259 LOC390937A0A1W2PQ73 354 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TMEM129A0AVI4 362 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 PRAMEF27A3QJZ7 478 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CCT8L1PA6NM43 557 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 H3BNH8 94 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 M0R1B8 84 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SULT2B1O00204 365 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 GPR171O14626 319 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 AZIN1O14977 448 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SCAMP2O15127 329 aaKnown RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 RIPK2O43353 540 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 DNPH1O43598 174 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 LILRA1O75019 489 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 UGT2B17O75795 530 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 PMS2P2O95744 297 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 C6orf47O95873 294 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 TGFAP01135 160 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 GUSBP08236 651 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 MYL2P10916 166 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 UBL4AP11441 157 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 IMPDH2P12268 514 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CPA3P15088 417 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 ZNF23P17027 643 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 ATP6V1C1P21283 382 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CRHR1P34998 444 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 PGM1P36871 562 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 ASMTP46597 345 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CLK1P49759 484 aaKnown RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 PDLIM4P50479 330 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 RPL38P63173 70 aaKnown RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 CSNK2A1P68400 391 aaPredicted RBP5.33□□□□□ -1.56
VRK3-220ENST00000600259 PHC1P78364 1004 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CHRNB3Q05901 458 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 MERTKQ12866 999 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CBFBQ13951 182 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 GGTLC2Q14390 218 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SQLEQ14534 574 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SLC17A1Q14916 467 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 CR1LQ2VPA4 569 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 SYT14P1Q58G82 188 aa5.33□□□□□ -1.56
VRK3-220ENST00000600259 PDZK1Q5T2W1 519 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms