RNA–Protein interactions for RNA: ENST00000599156.5

DDX49-208, Transcript of DEAD-box helicase 49, human

TSL 5

Gene DDX49, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX49-208	ENST00000599156	ZFAND2B	Q8WV99	257 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	ST8SIA1	Q92185	356 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	CCDC126	Q96EE4	140 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	CCT7	Q99832	543 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	C1orf109	Q9NX04	203 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	DCTN4	Q9UJW0	460 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	AMDHD2	Q9Y303	409 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	TRAF6	Q9Y4K3	522 aa		13.78	□□□□□ -0.2
DDX49-208	ENST00000599156	PDLIM1	O00151	329 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	MRPL33	O75394	65 aa	Known RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	ITGA5	P08648	1049 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	UBL4A	P11441	157 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	NTF4	P34130	210 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SRP14	P37108	136 aa	Known RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SLC16A1	P53985	500 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SNRPD2	P62316	118 aa	Known RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	CARTPT	Q16568	116 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SYT14P1	Q58G82	188 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	DCST2	Q5T1A1	773 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	TMCO5A	Q8N6Q1	288 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	ADAMTS15	Q8TE58	950 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	MTERF3	Q96E29	417 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	ZMYND19	Q96E35	227 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	ZHX1-C8orf76	Q96EF9	292 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	FCRL1	Q96LA6	429 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SOX7	Q9BT81	388 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	ACTRT3	Q9BYD9	372 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	BPESC1	Q9GZL8	116 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	LAT2	Q9GZY6	243 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SLC17A5	Q9NRA2	495 aa		13.77	□□□□□ -0.21
DDX49-208	ENST00000599156	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX49-208	ENST00000599156		A0A0A6YYJ9	748 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	ATP6V1G2-DDX39B	F2Z307	99 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	SLCO1B7	G3V0H7	640 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	SLC28A1	O00337	649 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	GSTA1	P08263	222 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	KRT16	P08779	473 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	UROS	P10746	265 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	DDX5	P17844	614 aa	Known RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	SDC1	P18827	310 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	CCR4	P51679	360 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	FOXG1	P55316	489 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	SESN3	P58005	492 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	TGFBR3	Q03167	851 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	BHLHB9	Q6PI77	547 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	ZNF614	Q8N883	585 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	PIGX	Q8TBF5	258 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	TMEM234	Q8WY98	164 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	HPS1	Q92902	700 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	TSSK3	Q96PN8	268 aa		13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	THUMPD3	Q9BV44	507 aa	Known RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	QRSL1	Q9H0R6	528 aa	Known RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156	FAF1	Q9UNN5	650 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX49-208	ENST00000599156		A0A087WUV0	522 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX49-208	ENST00000599156		B9A039	149 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	DNPH1	O43598	174 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	FKBP2	P26885	142 aa	Known RBP	13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	ASMT	P46597	345 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	MERTK	Q12866	999 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	ZSWIM7	Q19AV6	140 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	LINC01356	Q8N9X3	169 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	OR52E4	Q8NGH9	312 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	SGMS2	Q8NHU3	365 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	VRK1	Q99986	396 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	ACER3	Q9NUN7	267 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	PARPBP	Q9NWS1	579 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	UPB1	Q9UBR1	384 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	BAIAP2L1	Q9UHR4	511 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	MOK	Q9UQ07	419 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	SPIN1	Q9Y657	262 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	KCNE3	Q9Y6H6	103 aa		13.75	□□□□□ -0.21
DDX49-208	ENST00000599156	SERINC4	A6NH21	518 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	STAMBP	O95630	424 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	PMS2P2	O95744	297 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	WNT11	O96014	354 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	TACSTD2	P09758	323 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	TFPI	P10646	304 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	PGC	P20142	388 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	EFNA1	P20827	205 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	GIF	P27352	417 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	SERPINF1	P36955	418 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	APOBEC1	P41238	236 aa	Known RBP	13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	MAGEA8	P43361	318 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	CCT3	P49368	545 aa	Known RBP	13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	COMP	P49747	757 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	CHN2	P52757	468 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	PRPS1	P60891	318 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	SLC25A3	Q00325	362 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	SKP2	Q13309	424 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	FAM174B	Q3ZCQ3	159 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	PDZK1	Q5T2W1	519 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	C8orf74	Q6P047	294 aa		13.74	□□□□□ -0.21
DDX49-208	ENST00000599156	UGT2A3	Q6UWM9	527 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms