RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 LRRTM1Q86UE6 522 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 AMIGO1Q86WK6 493 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 GATSQ8NAP1 163 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 OR5T1Q8NG75 326 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 CCDC26Q8TAB7 109 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 KCNG3Q8TAE7 436 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ZNRF4Q8WWF5 429 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PIK3R3Q92569 461 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SLCO2A1Q92959 643 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PINX1Q96BK5 328 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PYCR2Q96C36 320 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PPP1R14BQ96C90 147 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF689Q96CS4 500 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 MOCOSQ96EN8 888 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SNF8Q96H20 258 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 COQ2Q96H96 371 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SPATA33Q96N06 139 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PANX1Q96RD7 426 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SH3GL3Q99963 347 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RBM4BQ9BQ04 359 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 UBAC1Q9BSL1 405 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 NDEL1Q9GZM8 345 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SDCBP2Q9H190 292 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RANBP3Q9H6Z4 567 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RNF121Q9H920 327 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 MRM3Q9HC36 420 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SLC2A8Q9NY64 477 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RDH8Q9NYR8 311 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RBAKQ9NYW8 714 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 NDUFA13Q9P0J0 144 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 STOX2Q9P2F5 926 aaPredicted RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 TBC1D24Q9ULP9 559 aa4.16□□□□□ -1.74
SMAD4-216ENST00000593223 RUVBL2Q9Y230 463 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 SMG1Q96Q15 3661 aaKnown RBP4.16□□□□□ -1.74
SMAD4-216ENST00000593223 PRRC2BQ5JSZ5 2229 aaKnown RBP4.15□□□□□ -1.74
SMAD4-216ENST00000593223 FLT4P35916 1363 aa4.15□□□□□ -1.74
SMAD4-216ENST00000593223 A0A0G2JMZ2 1700 aa4.15□□□□□ -1.74
SMAD4-216ENST00000593223 SCN9AQ15858 1988 aa4.15□□□□□ -1.74
SMAD4-216ENST00000593223 TRAV26-1A0A087WT03 109 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 A0A0U1RRA0 63 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM129A0AVI4 362 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ESYT2A0FGR8 921 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TRPC5OSA6NMA1 111 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 NME2P1O60361 137 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 DFNA5O60443 496 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 HCN1O60741 890 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 STX11O75558 287 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 OR4F21O95013 312 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 LCA5LO95447 670 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 UBTFL1P0CB47 393 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF10P21506 573 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CD80P33681 288 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 SFTPDP35247 375 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 FDFT1P37268 417 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 NBL1P41271 181 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CBX5P45973 191 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 KCNJ3P48549 501 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 XGP55808 180 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CLDN15P56746 228 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 POLR2GP62487 172 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 SKP1P63208 163 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CSNK1G2P78368 415 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CYCSP99999 105 aaKnown RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 FGL1Q08830 312 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CDH18Q13634 790 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TMEM132DQ14C87 1099 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 NECTIN1Q15223 517 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 RBBP7Q16576 425 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TTMPQ5BVD1 217 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 BEX5Q5H9J7 111 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 PAGE2BQ5JRK9 111 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 EOGTQ5NDL2 527 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ATF7IP2Q5U623 682 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TWF2Q6IBS0 349 aaKnown RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CYB5D1Q6P9G0 228 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 Q6ZRP5 223 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 NCCRP1Q6ZVX7 275 aaPredicted RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CHMP1BQ7LBR1 199 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 DCXRQ7Z4W1 244 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 NRARPQ7Z6K4 114 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 VRK2Q86Y07 508 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 PLCZ1Q86YW0 608 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 LAX1Q8IWV1 398 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 CCDC36Q8IYA8 594 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF683Q8IZ20 524 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 OR7G1Q8NGA0 311 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 OR13C9Q8NGT0 318 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 OSTF1Q92882 214 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TOP1MTQ969P6 601 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 FAM46BQ96A09 425 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 TGS1Q96RS0 853 aaKnown RBP4.15□□□□□ -1.75
SMAD4-216ENST00000593223 RAB40CQ96S21 281 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 VGLL1Q99990 258 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 C17orf62Q9BQA9 187 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF559Q9BR84 538 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 MFFQ9GZY8 342 aa4.15□□□□□ -1.75
SMAD4-216ENST00000593223 DEFB129Q9H1M3 183 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms