RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 LYVE1Q9Y5Y7 322 aa10.82□□□□□ -0.68
DDX39A-219ENST00000592927 TACC2O95359 2948 aa10.82□□□□□ -0.68
DDX39A-219ENST00000592927 ANKHD1Q8IWZ3 2542 aaKnown RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 NPIPA5A0A0B4J1W7 369 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 ARRDC5A6NEK1 342 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 NPIPA7E9PJI5 369 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 M0R3H8 397 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PDLIM1O00151 329 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 EI24O14681 340 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 SCO2O43819 266 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 FADS1O60427 444 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 FMO6PO60774 539 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 GADD45GO95257 159 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 OXSR1O95747 527 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 NPIPA8P0DM63 369 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 THRBP10828 461 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 AQP4P55087 323 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 KRTAP10-9P60411 292 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PLGLB1Q02325 96 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 EPS8Q12929 822 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 TAF11Q15544 211 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 RFX4Q33E94 735 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PDZK1Q5T2W1 519 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 FAM180AQ6UWF9 173 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 DEF8Q6ZN54 512 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 ZNF550Q7Z398 422 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 ZNF440Q8IYI8 595 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 CLIP4Q8N3C7 705 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 LINC00471Q8N535 108 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 TOR1AIP2Q8NFQ8 470 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 OR4D11Q8NGI4 311 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 OR4C15Q8NGM1 316 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PHF10Q8WUB8 498 aaKnown RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 RNF138Q8WVD3 245 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PSD2Q9BQI7 771 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 Q9H521 79 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 ANKRD19PQ9H560 264 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 PROK2Q9HC23 129 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 GALNT9Q9HCQ5 603 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 SDHAF3Q9NRP4 125 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 ACER3Q9NUN7 267 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 TUBA8Q9NY65 449 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 VNN3Q9NY84 501 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 TESQ9UGI8 421 aaKnown RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 BOKQ9UMX3 212 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-219ENST00000592927 A4GNTQ9UNA3 340 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 TESMINQ9Y4I5 508 aa10.81□□□□□ -0.68
DDX39A-219ENST00000592927 A0A1W2PQD3 144 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 A0A1W2PRQ8 180 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 SERINC4A6NH21 518 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ALG1L2C9J202 215 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 H3BNH8 94 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 J3KTA2 159 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 NDUFB5O43674 189 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 TRIM3O75382 744 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 OR5F1O95221 314 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 CRYABP02511 175 aaKnown RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ALPLP05186 524 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 H1F0P07305 194 aaKnown RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 COX6B1P14854 86 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 RFC3P40938 356 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PTGDSP41222 190 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 LIMS1P48059 325 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 CDH12P55289 794 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PPP2R2BQ00005 443 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PMP22Q01453 160 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ST3GAL3Q11203 375 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 DGCR6Q14129 220 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 NPTX1Q15818 432 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 MICAQ29983 383 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 KLHL26Q53HC5 615 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 TMEM179BQ7Z7N9 219 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 HMGN2P46Q86SG4 172 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 MARCH3Q86UD3 253 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 CDH24Q86UP0 819 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 COMTD1Q86VU5 262 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 RBM45Q8IUH3 476 aaKnown RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 LACC1Q8IV20 430 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 OFCC1Q8IZS5 231 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ZNF614Q8N883 585 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ZFP62Q8NB50 900 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 MAGEE2Q8TD90 523 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 GIPC3Q8TF64 312 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 TMEM41AQ96HV5 264 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 FRMD6Q96NE9 622 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 TAAR6Q96RI8 345 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 NMNAT1Q9HAN9 279 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 HHATLQ9HCP6 504 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ZFP64Q9NPA5 681 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 SMPD3Q9NY59 655 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PDP1Q9P0J1 537 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-219ENST00000592927 PPP4R1LQ9P1A2 415 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 TMCC3Q9ULS5 477 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
DDX39A-219ENST00000592927 WIF1Q9Y5W5 379 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms