RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 SERINC1Q9NRX5 453 aa12.36□□□□□ -0.43
APOC1-208ENST00000592535 RAI1Q7Z5J4 1906 aaPredicted RBP12.36□□□□□ -0.43
APOC1-208ENST00000592535 AP3D1O14617 1153 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 ZCCHC18P0CG32 403 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 ETFAP13804 333 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 RPS4Y1P22090 263 aaKnown RBP12.35□□□□□ -0.43
APOC1-208ENST00000592535 LOXP28300 417 aaPredicted RBP12.35□□□□□ -0.43
APOC1-208ENST00000592535 SYT14P1Q58G82 188 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 GRINAQ7Z429 371 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 SLC43A2Q8N370 569 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 WDR60Q8WVS4 1066 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
APOC1-208ENST00000592535 ITCHQ96J02 903 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 HS3ST6Q96QI5 342 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 ALPK1Q96QP1 1244 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 PSD2Q9BQI7 771 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 CCDC106Q9BWC9 280 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 RMND5AQ9H871 391 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 MTHFD2LQ9H903 347 aaPredicted RBP12.35□□□□□ -0.43
APOC1-208ENST00000592535 TPT1P8Q9HAU6 139 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
APOC1-208ENST00000592535 ING1Q9UK53 422 aaPredicted RBP12.35□□□□□ -0.43
APOC1-208ENST00000592535 FAM234BA2RU67 622 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 ATP8B1O43520 1251 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 CYTIPO60759 359 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 FESP07332 822 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 YES1P07947 543 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 TFPIP10646 304 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 PPP3CBP16298 524 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 IL7RP16871 459 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 CD53P19397 219 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 CRATP43155 626 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 DIO1P49895 249 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 IDH3AP50213 366 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 DEFB113Q30KQ7 82 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 C6orf10Q5SRN2 563 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 SLC2A7Q6PXP3 512 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 TMPPEQ6ZT21 453 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 HDXQ7Z353 690 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 CMIPQ8IY22 773 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 SLC25A43Q8WUT9 341 aaPredicted RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 DNAJA3Q96EY1 480 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 ACTR6Q9GZN1 396 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 VIPAS39Q9H9C1 493 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 BCO1Q9HAY6 547 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 FANCFQ9NPI8 374 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 TCF7L2Q9NQB0 619 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 KLHL9Q9P2J3 617 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 P2RX2Q9UBL9 471 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 CHRNA9Q9UGM1 479 aa12.34□□□□□ -0.43
APOC1-208ENST00000592535 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
APOC1-208ENST00000592535 DSCAMO60469 2012 aa12.33□□□□□ -0.43
APOC1-208ENST00000592535 SULT2B1O00204 365 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 KLF4O43474 513 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 GCM2O75603 506 aaPredicted RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 BCHEP06276 602 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 DBIP07108 87 aaKnown RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 CCNA2P20248 432 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 PSMB1P20618 241 aaKnown RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 MAGEA8P43361 318 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 MRPL19P49406 292 aaKnown RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 DSTNP60981 165 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 STX1BP61266 288 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 RASGEF1BQ0VAM2 473 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 TSC22D1Q15714 1073 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 RPS26P11Q5JNZ5 115 aaPredicted RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 VRK2Q86Y07 508 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 ADGRG3Q86Y34 549 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 GABRG1Q8N1C3 465 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 ZNF775Q96BV0 537 aaPredicted RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 ARL5BQ96KC2 179 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 TMUB1Q9BVT8 246 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 OR11A1Q9GZK7 315 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 PAIP1Q9H074 479 aaKnown RBP12.33□□□□□ -0.44
APOC1-208ENST00000592535 GPR52Q9Y2T5 361 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 DSPPQ9NZW4 1301 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 ITPR3Q14573 2671 aa12.33□□□□□ -0.44
APOC1-208ENST00000592535 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.32□□□□□ -0.44
APOC1-208ENST00000592535 SASH3O75995 380 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 TGDSO95455 350 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 TFPTP0C1Z6 253 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 HOXB9P17482 250 aaPredicted RBP12.32□□□□□ -0.44
APOC1-208ENST00000592535 EDNRAP25101 427 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 CRISP3P54108 245 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 AQP5P55064 265 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 CSNK2A1P68400 391 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms