RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SEC14L5O43304 696 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-214ENST00000590556 OPN1LWP04000 364 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 HTR2AP28223 471 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 TACR3P29371 465 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 CA7P43166 264 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 POLR2HP52434 150 aaKnown RBP17.26■□□□□ 0.35
DDX39A-214ENST00000590556 SELENBP1Q13228 472 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 C1QL3Q5VWW1 255 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 CBLL1Q75N03 491 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 CARM1Q86X55 608 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 LACC1Q8IV20 430 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 ULK2Q8IYT8 1036 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 OR4D11Q8NGI4 311 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 OR6T1Q8NGN1 323 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 PRR14Q9BWN1 585 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 ADAM19Q9H013 955 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 TMEM27Q9HBJ8 222 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 OSGIN1Q9UJX0 560 aa17.26■□□□□ 0.35
DDX39A-214ENST00000590556 TMED7-TICAM2A0A0A6YYA0 188 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 GJE1A6NN92 205 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 AHRRA9YTQ3 701 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 FMO6PO60774 539 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 WDR1O75083 606 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 HOXD4P09016 255 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 GABRA1P14867 456 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 TNFRSF1BP20333 461 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 ACVR2AP27037 513 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 SUCLG1P53597 346 aaKnown RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 CLDN20P56880 219 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 TRIM25Q14258 630 aaKnown RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 SF3B4Q15427 424 aaKnown RBP eCLIP17.25■□□□□ 0.352e-9■■■□□ 18.1
DDX39A-214ENST00000590556 NPTX1Q15818 432 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 C3P1Q6ZMU1 363 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 VTCN1Q7Z7D3 282 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 ADGRG3Q86Y34 549 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 RBM45Q8IUH3 476 aaKnown RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 EID3Q8N140 333 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 LSMEM1Q8N8F7 131 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 HSH2DQ96JZ2 352 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 NSMCE2Q96MF7 247 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 MCHR1Q99705 422 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 MUC13Q9H3R2 512 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 DCAF13Q9NV06 445 aaKnown RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 CHRNA9Q9UGM1 479 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 TMED7Q9Y3B3 224 aa17.25■□□□□ 0.35
DDX39A-214ENST00000590556 SPIN1Q9Y657 262 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-214ENST00000590556 A0A1B0GWA3 101 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 H0YC42 278 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 EIF1AYO14602 144 aaKnown RBP17.24■□□□□ 0.35
DDX39A-214ENST00000590556 GSC2O15499 205 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 TPST2O60704 377 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 CCNA2P20248 432 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 CXCR1P25024 350 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 SFTPDP35247 375 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 PTGER4P35408 488 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 OR1E2P47887 323 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 TPD52P55327 224 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-214ENST00000590556 CLDN15P56746 228 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 OR1Q1Q15612 314 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 TMEM176BQ3YBM2 270 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-214ENST00000590556 C3orf33Q6P1S2 294 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 FKBP9P1Q75LS8 142 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 CHMP1BQ7LBR1 199 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 GGNQ86UU5 652 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 C3orf49Q96BT1 292 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 CCDC124Q96CT7 223 aaKnown RBP17.24■□□□□ 0.35
DDX39A-214ENST00000590556 KLHL15Q96M94 604 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 TUBA1CQ9BQE3 449 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 SELENONQ9NZV5 590 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 ACTR3BQ9P1U1 418 aa17.24■□□□□ 0.35
DDX39A-214ENST00000590556 SAMD4AQ9UPU9 718 aaKnown RBP17.24■□□□□ 0.35
DDX39A-214ENST00000590556 HIVEP3Q5T1R4 2406 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 A0A1B0GUH1 482 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 CCL21O00585 134 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 LRRTM2O43300 516 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 TFPIP10646 304 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 FKBP2P26885 142 aaKnown RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 SHC1P29353 583 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 RPS3AP61247 264 aaKnown RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 C4orf17Q53FE4 359 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 IFI44LQ53G44 452 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 C1orf185Q5T7R7 199 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 ESPNLQ6ZVH7 1005 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 DHFR2Q86XF0 187 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 OR2V1Q8NHB1 315 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 ZPLD1Q8TCW7 415 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 SLC25A43Q8WUT9 341 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 DNAJA4Q8WW22 397 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 GEMIN6Q8WXD5 167 aaKnown RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 RELTQ969Z4 430 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 MCUR1Q96AQ8 359 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 CADM1Q9BY67 442 aaKnown RBP17.23■□□□□ 0.35
DDX39A-214ENST00000590556 MYO7BQ6PIF6 2116 aa17.23■□□□□ 0.35
DDX39A-214ENST00000590556 A0A0J9YW62 118 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 TMEM72A0PK05 275 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 CPSF4LA6NMK7 179 aaKnown RBP17.22■□□□□ 0.35
DDX39A-214ENST00000590556 E9PLN8 166 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 ADAMDEC1O15204 470 aa17.22■□□□□ 0.35
DDX39A-214ENST00000590556 PRKD3O94806 890 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms