RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ZHX1-C8orf76Q96EF9 292 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 ZNF300Q96RE9 604 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 TMEM109Q9BVC6 243 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 POLE3Q9NRF9 147 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 EMC3Q9P0I2 261 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 SLC35A3Q9Y2D2 325 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 RAP2CQ9Y3L5 183 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 WDR45Q9Y484 360 aa15.89■□□□□ 0.13
PRKCSH-211ENST00000590098 DPRXA6NFQ7 191 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 OVOL3O00110 214 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 BIRC5O15392 142 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 KIAA0513O60268 411 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 SOD3P08294 240 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 DANCRP0C864 163 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 IDUAP35475 653 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 APOBEC1P41238 236 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 KHKP50053 298 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 RPL14P50914 215 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 MAPK14Q16539 360 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 KRT71Q3SY84 523 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 TNFAIP8L2Q6P589 184 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 SSX8Q7RTT4 187 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 ATG4DQ86TL0 474 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 MTDHQ86UE4 582 aaKnown RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 KBTBD8Q8NFY9 601 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 ZNF75CPQ92670 426 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 NEUROG1Q92886 237 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 RAB8BQ92930 207 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 ROPN1LQ96C74 230 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 LIPT1Q9Y234 373 aa15.88■□□□□ 0.13
PRKCSH-211ENST00000590098 KIAA1324LA8MWY0 1029 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 ANKRD28O15084 1053 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 RGS16O15492 202 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 GUSBP08236 651 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 GGT1P19440 569 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 FKBP2P26885 142 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 RYKP34925 604 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 CHI3L1P36222 383 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 PGM1P36871 562 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 SLC1A6P48664 564 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 HPCAP84074 193 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 GPAT3Q53EU6 434 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 TIMM23BQ5SRD1 257 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 TYW3Q6IPR3 259 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 P2RY8Q86VZ1 359 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 KIRREL3Q8IZU9 778 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 UBE2J2Q8N2K1 259 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 TESCQ96BS2 214 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 ALG2Q9H553 416 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 CHRNA9Q9UGM1 479 aa15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 MAGED1Q9Y5V3 778 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 SONP18583 2426 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-211ENST00000590098 SCN2BO60939 215 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 LBPP18428 481 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 IGHV1-2P23083 117 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 CDKN1AP38936 164 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 CLNS1AP54105 237 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 FAPQ12884 760 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 PDK3Q15120 406 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 DPY19L1Q2PZI1 675 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 SAXO2Q658L1 398 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 SEZ6L2Q6UXD5 910 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 DNAJC14Q6Y2X3 702 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 GRINAQ7Z429 371 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 ARFGAP2Q8N6H7 521 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 FAM71CQ8NEG0 241 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 NEURL3Q96EH8 262 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 MDFIQ99750 246 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 CCDC106Q9BWC9 280 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 TRIM2Q9C040 744 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 SAP130Q9H0E3 1048 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 CTPS2Q9NRF8 586 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 FAIMQ9NVQ4 179 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 CISD1Q9NZ45 108 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 MARCOQ9UEW3 520 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 NOSIPQ9Y314 301 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 HDGFL3Q9Y3E1 203 aa15.86■□□□□ 0.13
PRKCSH-211ENST00000590098 PLCE1Q9P212 2302 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 IGKV3D-15A0A087WSY6 115 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 RNF223E7ERA6 249 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 GPR171O14626 319 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 TM9SF1O15321 606 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 COX5AP20674 150 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 EDNRAP25101 427 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 S100A3P33764 101 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 PHC1P78364 1004 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 CASP8Q14790 479 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 SPANXN4Q5MJ08 99 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 ABLIM2Q6H8Q1 611 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 FRRS1Q6ZNA5 592 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 LRRC34Q8IZ02 419 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 PIGXQ8TBF5 258 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 APH1AQ96BI3 265 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 SLC35A5Q9BS91 424 aa15.85■□□□□ 0.13
PRKCSH-211ENST00000590098 NUF2Q9BZD4 464 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms