RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
ACTN4-211ENST00000589528 MSI2Q96DH6 328 aaKnown RBP13.38□□□□□ -0.27
ACTN4-211ENST00000589528 MTERF3Q96E29 417 aa13.38□□□□□ -0.27
ACTN4-211ENST00000589528 FBXO17Q96EF6 278 aa13.38□□□□□ -0.27
ACTN4-211ENST00000589528 C12orf65Q9H3J6 166 aaKnown RBP13.38□□□□□ -0.27
ACTN4-211ENST00000589528 EML4Q9HC35 981 aaKnown RBP13.38□□□□□ -0.27
ACTN4-211ENST00000589528 TMED5Q9Y3A6 229 aa13.38□□□□□ -0.27
ACTN4-211ENST00000589528 CCL27Q9Y4X3 112 aa13.38□□□□□ -0.27
ACTN4-211ENST00000589528 SPIN1Q9Y657 262 aaPredicted RBP13.38□□□□□ -0.27
ACTN4-211ENST00000589528 NPIPB8E9PQR5 432 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 G3V2L1 256 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 NDUFS8O00217 210 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 RPL3P39023 403 aaKnown RBP13.37□□□□□ -0.27
ACTN4-211ENST00000589528 NR4A2P43354 598 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 PHC1P78364 1004 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 RUNX1T1Q06455 604 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 PDK3Q15120 406 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
ACTN4-211ENST00000589528 PDZK1Q5T2W1 519 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 C9orf135Q5VTT2 229 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 MTDHQ86UE4 582 aaKnown RBP13.37□□□□□ -0.27
ACTN4-211ENST00000589528 PIGXQ8TBF5 258 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 ST8SIA1Q92185 356 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 THUMPD3Q9BV44 507 aaKnown RBP13.37□□□□□ -0.27
ACTN4-211ENST00000589528 TNFRSF12AQ9NP84 129 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 SIRT3Q9NTG7 399 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-211ENST00000589528 UPB1Q9UBR1 384 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 TBK1Q9UHD2 729 aa13.37□□□□□ -0.27
ACTN4-211ENST00000589528 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 TCF21O43680 179 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 GLRA3O75311 464 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 CSTAP01040 98 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 ABHD2P08910 425 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 LINC00032P0C843 101 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 PGCP20142 388 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 GCAP28676 217 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 SNRPD2P62316 118 aaKnown RBP13.36□□□□□ -0.27
ACTN4-211ENST00000589528 GPR68Q15743 365 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 RFTN2Q52LD8 501 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-211ENST00000589528 KLHL24Q6TFL4 600 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 SLC46A3Q7Z3Q1 461 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 DDIASQ8IXT1 998 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 OR7A2PQ8NGA2 310 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 ZNF524Q96C55 264 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 DNAJA3Q96EY1 480 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 VRK1Q99986 396 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-211ENST00000589528 KCNS3Q9BQ31 491 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 PRR14Q9BWN1 585 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 LAT2Q9GZY6 243 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 MYOZ1Q9NP98 299 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-211ENST00000589528 ATAD3AQ9NVI7 634 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 PSMC3IPQ9P2W1 217 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-211ENST00000589528 MALT1Q9UDY8 824 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 AMDHD2Q9Y303 409 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
ACTN4-211ENST00000589528 DYSFO75923 2080 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 SERINC4A6NH21 518 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 ATP6V1G2-DDX39BF2Z307 99 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 ETV2O00321 342 aaPredicted RBP13.35□□□□□ -0.27
ACTN4-211ENST00000589528 AZIN1O14977 448 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 SCAMP2O15127 329 aaKnown RBP13.35□□□□□ -0.27
ACTN4-211ENST00000589528 CFLARO15519 480 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 UBTFL6P0CB48 400 aaPredicted RBP13.35□□□□□ -0.27
ACTN4-211ENST00000589528 MAPK1P28482 360 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 MAGEA8P43361 318 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 SESN3P58005 492 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 DNAJB13P59910 316 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 TGFBR3Q03167 851 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 GABRA6Q16445 453 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 CR1LQ2VPA4 569 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 LSM12Q3MHD2 195 aaKnown RBP13.35□□□□□ -0.27
ACTN4-211ENST00000589528 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 LIPMQ5VYY2 423 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 CNPY4Q8N129 248 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 RFLNBQ8N5W9 214 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 OR52E4Q8NGH9 312 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 OR2T11Q8NH01 316 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 FCRL1Q96LA6 429 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 SORCS2Q96PQ0 1159 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 EMCNQ9ULC0 261 aa13.35□□□□□ -0.27
ACTN4-211ENST00000589528 LOC390937A0A1W2PQ73 354 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 ESPNB1AK53 854 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 NPIPB9F8W1W9 429 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 LSM1O15116 133 aaKnown RBP13.34□□□□□ -0.27
ACTN4-211ENST00000589528 PMS2P2O95744 297 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 WNT11O96014 354 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 ITGA5P08648 1049 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 BCKDHAP12694 445 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 SOAT1P35610 550 aa13.34□□□□□ -0.27
ACTN4-211ENST00000589528 SRP14P37108 136 aaKnown RBP13.34□□□□□ -0.27
ACTN4-211ENST00000589528 APOBEC1P41238 236 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms