RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CLK1P49759 484 aaKnown RBP17.67■□□□□ 0.42
CIRBP-220ENST00000588917 LHX2P50458 406 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF136P52737 540 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 SELENBP1Q13228 472 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 IFI44LQ53G44 452 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 PDSS1Q5T2R2 415 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 ULK3Q6PHR2 472 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 CHMP1BQ7LBR1 199 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 FGD2Q7Z6J4 655 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 CARM1Q86X55 608 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 LILRA2Q8N149 483 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 OR5M1Q8NGP8 315 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 SLC25A43Q8WUT9 341 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-220ENST00000588917 WDYHV1Q96HA8 205 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 LRGUKQ96M69 825 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 PSMG3-AS1Q96PY0 264 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 MCHR1Q99705 422 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 KLHDC3Q9BQ90 382 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 CADM1Q9BY67 442 aaKnown RBP17.67■□□□□ 0.42
CIRBP-220ENST00000588917 PRDM14Q9GZV8 571 aa17.67■□□□□ 0.42
CIRBP-220ENST00000588917 PAQR5Q9NXK6 330 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-220ENST00000588917 PDE5AO76074 875 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 PNMTP11086 282 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 TACR3P29371 465 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 STARP49675 285 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 RPS3AP61247 264 aaKnown RBP17.66■□□□□ 0.42
CIRBP-220ENST00000588917 C3orf33Q6P1S2 294 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF613Q6PF04 617 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 ESPNLQ6ZVH7 1005 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 YTHDF3Q7Z739 585 aaKnown RBP17.66■□□□□ 0.42
CIRBP-220ENST00000588917 OR6T1Q8NGN1 323 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 VANGL1Q8TAA9 524 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-220ENST00000588917 ZPLD1Q8TCW7 415 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 GEMIN6Q8WXD5 167 aaKnown RBP17.66■□□□□ 0.42
CIRBP-220ENST00000588917 SLC47A1Q96FL8 570 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 PYURFQ96I23 114 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 CLPTM1LQ96KA5 538 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 TRIM15Q9C019 465 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 TP63Q9H3D4 680 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-220ENST00000588917 CAMK2AQ9UQM7 478 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 OSGIN2Q9Y236 505 aa17.66■□□□□ 0.42
CIRBP-220ENST00000588917 RP1L1Q8IWN7 2480 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-220ENST00000588917 TMED7-TICAM2A0A0A6YYA0 188 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 A0A1B0GUH1 482 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 TMEM229AB2RXF0 380 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 SHISA8B8ZZ34 492 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 M0R3H8 397 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF208O43345 1280 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 IFNW1P05000 195 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 STSP08842 583 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 ZNF708P17019 499 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 HOXC5Q00444 222 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 MRPL49Q13405 166 aaKnown RBP17.65■□□□□ 0.42
CIRBP-220ENST00000588917 OR1Q1Q15612 314 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 SWT1Q5T5J6 900 aaKnown RBP17.65■□□□□ 0.42
CIRBP-220ENST00000588917 LCN8Q6JVE9 175 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 COMTD1Q86VU5 262 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 ADGRG3Q86Y34 549 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 DOLPP1Q86YN1 238 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 TIGARQ9NQ88 270 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 CTPS2Q9NRF8 586 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 ALKBH4Q9NXW9 302 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 CHRNA9Q9UGM1 479 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 OSGIN1Q9UJX0 560 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 TMED7Q9Y3B3 224 aa17.65■□□□□ 0.42
CIRBP-220ENST00000588917 TRGV8A0A0C4DH27 118 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 PRKD3O94806 890 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 HOXB6P17509 224 aaKnown RBP17.64■□□□□ 0.41
CIRBP-220ENST00000588917 GNLYP22749 145 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 CLDN18P56856 261 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 ALG10BQ5I7T1 473 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 ENTPD8Q5MY95 495 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 ZNF585AQ6P3V2 769 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 POMZP3Q6PJE2 187 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 CD163Q86VB7 1156 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 ULK2Q8IYT8 1036 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 OR5M9Q8NGP3 310 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 PRR7Q8TB68 274 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 ZNF524Q96C55 264 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 DDIT4LQ96D03 193 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 HSH2DQ96JZ2 352 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 NPAS1Q99742 590 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 PNPLA3Q9NST1 481 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 TNFRSF10DQ9UBN6 386 aa17.64■□□□□ 0.41
CIRBP-220ENST00000588917 SPTAN1Q13813 2472 aaKnown RBP17.63■□□□□ 0.41
CIRBP-220ENST00000588917 SPENQ96T58 3664 aaKnown RBP17.63■□□□□ 0.41
CIRBP-220ENST00000588917 A0A1B0GWA3 101 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 ELOA3DA6NLF2 546 aaPredicted RBP17.63■□□□□ 0.41
CIRBP-220ENST00000588917 H0Y3Z8 333 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 ADAMDEC1O15204 470 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 EFNA2O43921 213 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 TPST2O60704 377 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 ITGA2P17301 1181 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 ACVR2AP27037 513 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 SLC7A1P30825 629 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 CA7P43166 264 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 OR1E2P47887 323 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 MS4A2Q01362 244 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 SRYQ05066 204 aa17.63■□□□□ 0.41
CIRBP-220ENST00000588917 EIF2S3LQ2VIR3 472 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms