RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 HSH2DQ96JZ2 352 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 NSMCE2Q96MF7 247 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 DCAF13Q9NV06 445 aaKnown RBP17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 OSGIN1Q9UJX0 560 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
CLPTM1-209ENST00000588855 HIVEP3Q5T1R4 2406 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 MPDZO75970 2070 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 TRGV8A0A0C4DH27 118 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 GSC2O15499 205 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 CPN1P15169 458 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 SHC1P29353 583 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 SUCLG1P53597 346 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 CLDN15P56746 228 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 RAC1P63000 192 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 MS4A2Q01362 244 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 SELENBP1Q13228 472 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 TRIM25Q14258 630 aaKnown RBP17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 C1QL3Q5VWW1 255 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ZNF585AQ6P3V2 769 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 PGM2L1Q6PCE3 622 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 CYP2R1Q6VVX0 501 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 C3P1Q6ZMU1 363 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 GGNQ86UU5 652 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ULK2Q8IYT8 1036 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 LILRA2Q8N149 483 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 FAM86B1Q8N7N1 296 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 LSMEM1Q8N8F7 131 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ATP6V1C2Q8NEY4 427 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 PRR7Q8TB68 274 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 MCHR1Q99705 422 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ZNF559Q9BR84 538 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ADAM19Q9H013 955 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 LRMDAQ9H2I8 198 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 ACTR3BQ9P1U1 418 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 V9GYQ6 96 aa17.1■□□□□ 0.33
CLPTM1-209ENST00000588855 FLNCQ14315 2725 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 KIAA1549Q9HCM3 1950 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 TMED7-TICAM2A0A0A6YYA0 188 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 A0A1B0GWA3 101 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 H0Y3Z8 333 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 STSP08842 583 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 SFTPDP35247 375 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 APOBEC1P41238 236 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 HTR3AP46098 478 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 POLR2HP52434 150 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 BCL2A1Q16548 175 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.09■□□□□ 0.331e-6■□□□□ 10.6
CLPTM1-209ENST00000588855 C3orf33Q6P1S2 294 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 TSPYL5Q86VY4 417 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 ADGRG3Q86Y34 549 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 PM20D2Q8IYS1 436 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 EID3Q8N140 333 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 MCUR1Q96AQ8 359 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 ASB9Q96DX5 294 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 TRIM2Q9C040 744 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 MUC13Q9H3R2 512 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 ALKBH4Q9NXW9 302 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 RPS6KB2Q9UBS0 482 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 SAMD4AQ9UPU9 718 aaKnown RBP17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 TMED7Q9Y3B3 224 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 ARHGAP21Q5T5U3 1957 aa17.09■□□□□ 0.33
CLPTM1-209ENST00000588855 CPSF4LA6NMK7 179 aaKnown RBP17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 FMO6PO60774 539 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 CCNA2P20248 432 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 CA7P43166 264 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 OR1Q1Q15612 314 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 IFI44LQ53G44 452 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 ENTPD8Q5MY95 495 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 DEF8Q6ZN54 512 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 FKBP9P1Q75LS8 142 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 MEIOBQ8N635 442 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 GEMIN6Q8WXD5 167 aaKnown RBP17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 TUBA1CQ9BQE3 449 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 TP63Q9H3D4 680 aaPredicted RBP17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 CHRNA9Q9UGM1 479 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 PRDM4Q9UKN5 801 aa17.08■□□□□ 0.32
CLPTM1-209ENST00000588855 A0A0B4J2E0 115 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 A0A1B0GX12 115 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 TMEM72A0PK05 275 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 FIGNL2A6NMB9 653 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 J3QKU1 62 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 EIF1AYO14602 144 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 WDR1O75083 606 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 SEMA7AO75326 666 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 PRKD3O94806 890 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 CASP6P55212 293 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 CTU2Q2VPK5 515 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 LCN8Q6JVE9 175 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 ATG4DQ86TL0 474 aaPredicted RBP17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 DHFR2Q86XF0 187 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 RPRMLQ8N4K4 120 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 PHF10Q8WUB8 498 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 ADGRG7Q96K78 797 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 KLHL15Q96M94 604 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 TMEM27Q9HBJ8 222 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 SERINC1Q9NRX5 453 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
CLPTM1-209ENST00000588855 PHF3Q92576 2039 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms