RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CT45A8P0DMV1 189 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 CT45A9P0DMV2 189 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 NR2F6P10588 404 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 GNAZP19086 355 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 XKP51811 444 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 GDF10P55107 478 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 AP1S2P56377 157 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 FGF12P61328 243 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 MGAT2Q10469 447 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 PDK3Q15120 406 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 NKPD1Q17RQ9 610 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 PRICKLE4Q2TBC4 344 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 ALKBH6Q3KRA9 238 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 TMEM35AQ53FP2 167 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 CT45A2Q5DJT8 189 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 OR4C11Q6IEV9 310 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 C6orf89Q6UWU4 347 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 VASH1Q7L8A9 365 aaPredicted RBP5.7□□□□□ -1.5
TPM4-210ENST00000588507 VSTM4Q8IW00 320 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 IL17RDQ8NFM7 739 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 PPP1R35Q8TAP8 253 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 SLC9A6Q92581 669 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 ELMOD3Q96FG2 381 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 NOX3Q9HBY0 568 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 HINT3Q9NQE9 182 aaKnown RBP5.7□□□□□ -1.5
TPM4-210ENST00000588507 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
TPM4-210ENST00000588507 TAB2Q9NYJ8 693 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 LCMT1Q9UIC8 334 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 ZNF639Q9UID6 485 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 DUSP13Q9UII6 198 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 GPR160Q9UJ42 338 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 TCAF1Q9Y4C2 921 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 CHST2Q9Y4C5 530 aa5.7□□□□□ -1.5
TPM4-210ENST00000588507 ARPC4-TTLL3A0A0A6YYG9 625 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CENPVL1A0A0U1RR11 272 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CENPVL3A0A0U1RRI6 287 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 A0A1W2PR48 441 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 P2RY10O00398 339 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 GPR171O14626 319 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 ZNF195O14628 629 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 EFNA2O43921 213 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 TTC4O95801 387 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 ANGPTL1O95841 491 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CELA3BP08861 270 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CPMP14384 443 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 PORP16435 677 aaPredicted RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 ELK4P28324 431 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 GLRXP35754 106 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 GP5P40197 560 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 EIF1P41567 113 aaKnown RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 CDKN2BP42772 138 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CORO7P57737 925 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 OR52E8Q6IFG1 317 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 OVCH2Q7RTZ1 564 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 MYPOPQ86VE0 399 aaPredicted RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 ZNF101Q8IZC7 436 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 ZCCHC7Q8N3Z6 543 aaKnown RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 SCCPDHQ8NBX0 429 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 OR4K14Q8NGD5 310 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CD200R1Q8TD46 325 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 THOC1Q96FV9 657 aaKnown RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 GPR21Q99679 349 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 TM2D3Q9BRN9 247 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 SORBS1Q9BX66 1292 aaKnown RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 PACSIN1Q9BY11 444 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 TBL1XR1Q9BZK7 514 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 RANBP3Q9H6Z4 567 aaPredicted RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 NANOGQ9H9S0 305 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 SAP30LQ9HAJ7 183 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 CRLF2Q9HC73 371 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 HHATLQ9HCP6 504 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 PRM3Q9NNZ6 103 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 EXD2Q9NVH0 621 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 TMEM45AQ9NWC5 275 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 MAT2BQ9NZL9 334 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 FLRT3Q9NZU0 649 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 ZNF490Q9ULM2 529 aaPredicted RBP5.69□□□□□ -1.5
TPM4-210ENST00000588507 LRCH1Q9Y2L9 728 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 MED16Q9Y2X0 877 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 FAM96BQ9Y3D0 163 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 NOX1Q9Y5S8 564 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 NPTNQ9Y639 398 aa5.69□□□□□ -1.5
TPM4-210ENST00000588507 A0A1W2PNR3 127 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 SDR42E2A6NKP2 422 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 F5H0A9 414 aaPredicted RBP5.68□□□□□ -1.5
TPM4-210ENST00000588507 SAP18O00422 153 aaKnown RBP5.68□□□□□ -1.5
TPM4-210ENST00000588507 PGRMC2O15173 223 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 SH3BGRLO75368 114 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 METTL18O95568 372 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 IGHV2-70P01814 119 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 OPN1SWP03999 348 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CHRM4P08173 479 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CBR1P16152 277 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 SLC7A1P30825 629 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 GRIA1P42261 906 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 VPS41P49754 854 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 RGS4P49798 205 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 FOXA1P55317 472 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms