RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PRKAB2O43741 272 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 GALR3O60755 368 aaPredicted RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 SCRG1O75711 98 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 NOL4O94818 638 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 GJB5O95377 273 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 HOXB6P17509 224 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 BCL3P20749 454 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 HMGB2P26583 209 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 GCAP28676 217 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 DUSP3P51452 185 aaPredicted RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ERVPABLB-1P60509 514 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 KLRB1Q12918 225 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PLD1Q13393 1074 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ARMC12Q5T9G4 340 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 FAM199XQ6PEV8 388 aaPredicted RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PAQR6Q6TCH4 344 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ZNF600Q6ZNG1 722 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 TRIM69Q86WT6 500 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 TGIF2LXQ8IUE1 241 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 MCOLN2Q8IZK6 566 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ALLCQ8N6M5 410 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 RAB3IL1Q8TBN0 382 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PKNOX2Q96KN3 472 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 MCCC1Q96RQ3 725 aaPredicted RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 CYP2S1Q96SQ9 504 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 SLC35A5Q9BS91 424 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 GLT8D2Q9H1C3 349 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PNNQ9H307 717 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 POPDC2Q9HBU9 364 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ZFP14Q9HCL3 533 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 MDFICQ9P1T7 246 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ANGPTL2Q9UKU9 493 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PRPF19Q9UMS4 504 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 ERVW-1Q9UQF0 538 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 CDK13Q14004 1512 aaKnown RBP4.29□□□□□ -1.72
TUBD1-208ENST00000588009 UNC79Q9P2D8 2635 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 RAPGEF2Q9Y4G8 1499 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 PHLPP1O60346 1717 aa4.29□□□□□ -1.72
TUBD1-208ENST00000588009 KIF26BQ2KJY2 2108 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 ACOD1A6NK06 481 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PRR23D1E9PI22 279 aaPredicted RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 E9PQ18 207 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 DIRAS1O95057 198 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PIGRP01833 764 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 HOXD4P09016 255 aaPredicted RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 RNF224P0DH78 156 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PRR23D2P0DMB1 279 aaPredicted RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 GNA11P29992 359 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 ELK3P41970 407 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 EPS15P42566 896 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 SSR1P43307 286 aaKnown RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PRRX1P54821 245 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PRMT2P55345 433 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 MS4A2Q01362 244 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 RCN1Q15293 331 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 SLC15A2Q16348 729 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 C1orf220Q5T0J3 134 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 KDM7AQ6ZMT4 941 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 GPRIN3Q6ZVF9 776 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 C9orf40Q8IXQ3 194 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 MTURNQ8N3F0 131 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 FGFRL1Q8N441 504 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 ATP6V0D2Q8N8Y2 350 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 CATSPER1Q8NEC5 780 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 FAM83FQ8NEG4 500 aaPredicted RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 FAF2Q96CS3 445 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 PSMB7Q99436 277 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 ZNF670Q9BS34 389 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 NAT10Q9H0A0 1025 aaKnown RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 YY1AP1Q9H869 796 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 CAB39LQ9H9S4 337 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 RAB20Q9NX57 234 aa4.28□□□□□ -1.72
TUBD1-208ENST00000588009 SCAF11Q99590 1463 aaKnown RBP4.28□□□□□ -1.72
TUBD1-208ENST00000588009 A0A0C4DFX4 3053 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 PKD1L2Q7Z442 2459 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 UHRF1BP1LA0JNW5 1464 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 A0A0J9YWU9 116 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 B4DXG7 233 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 RAMP3O60896 148 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 SH3BGRLO75368 114 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 KBTBD11O94819 623 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 CLDN9O95484 217 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 AP2A1O95782 977 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 CCR1P32246 355 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 NF2P35240 595 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 MAP3K8P41279 467 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 HLCSP50747 726 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 TPMTP51580 245 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 EFNA3P52797 238 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 OGDHQ02218 1023 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 SRSF5Q13243 272 aaKnown RBP4.27□□□□□ -1.73
TUBD1-208ENST00000588009 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
TUBD1-208ENST00000588009 UFSP1Q6NVU6 142 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms