RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	FAM156A	Q8NDB6	213 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	OR6T1	Q8NGN1	323 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	OR5M9	Q8NGP3	310 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	PRR7	Q8TB68	274 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	PHF10	Q8WUB8	498 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	C3orf49	Q96BT1	292 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	VKORC1	Q9BQB6	163 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	POLR2J2	Q9GZM3	115 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	PCDHAC1	Q9H158	963 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	POLR2J3	Q9H1A7	115 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	TMEM27	Q9HBJ8	222 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	CTPS2	Q9NRF8	586 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	DCAF13	Q9NV06	445 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	ACTR3B	Q9P1U1	418 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	CHRNA9	Q9UGM1	479 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	TINAG	Q9UJW2	476 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	OSGIN1	Q9UJX0	560 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	SAMD4A	Q9UPU9	718 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	CAMK2A	Q9UQM7	478 aa		11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	PHF3	Q92576	2039 aa	Known RBP	11.11	□□□□□ -0.63
PKN1-208	ENST00000586900	CD8B2	A6NJW9	211 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ARPC2	O15144	300 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ZNF208	O43345	1280 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	TPST2	O60704	377 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	DNAJC8	O75937	253 aa	Predicted RBP	11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	SERPINA1	P01009	418 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	NCK1	P16333	377 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	IL11	P20809	199 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	HTR2A	P28223	471 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	TACR3	P29371	465 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	SUCLG1	P53597	346 aa	Known RBP	11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	CLDN15	P56746	228 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	CLDN20	P56880	219 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	OR1Q1	Q15612	314 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	NPTX1	Q15818	432 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	PDSS1	Q5T2R2	415 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	SWT1	Q5T5J6	900 aa	Known RBP	11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	C1orf185	Q5T7R7	199 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	TMEM211	Q6ICI0	200 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ZNF585A	Q6P3V2	769 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	MTFR2	Q6P444	385 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	PGM2L1	Q6PCE3	622 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ZNF613	Q6PF04	617 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	MYO7B	Q6PIF6	2116 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	CARM1	Q86X55	608 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	CADM2	Q8N3J6	435 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	OR4D11	Q8NGI4	311 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	POP5	Q969H6	163 aa	Known RBP	11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ADGRG7	Q96K78	797 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	KLHL15	Q96M94	604 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	NSMCE2	Q96MF7	247 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	DMRTA2	Q96SC8	542 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	MCHR1	Q99705	422 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	WFDC6	Q9BQY6	131 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	THTPA	Q9BU02	230 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	CALHM2	Q9HA72	323 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	RPS6KB2	Q9UBS0	482 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	MEMO1	Q9Y316	297 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	SH3GLB1	Q9Y371	365 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	ARHGAP21	Q5T5U3	1957 aa		11.1	□□□□□ -0.63
PKN1-208	ENST00000586900	HELZ2	Q9BYK8	2649 aa	Known RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900		A0A0B4J2E0	115 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900		A0A1B0GWA3	101 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900		A0A1B0GX12	115 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900		H0Y3Z8	333 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900		M0R3H8	397 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	GSC2	O15499	205 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	ZNF682	O95780	498 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	PNMT	P11086	282 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	CXCR1	P25024	350 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	MSX2	P35548	267 aa	Predicted RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	HOXC5	Q00444	222 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	KCNC4	Q03721	635 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	SRY	Q05066	204 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	TRAP1	Q12931	704 aa	Known RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	CTU2	Q2VPK5	515 aa	Known RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	ACSF3	Q4G176	576 aa	Predicted RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	IFI44L	Q53G44	452 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	MTX3	Q5HYI7	312 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	C1QL3	Q5VWW1	255 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	NSUN5P2	Q63ZY6	315 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	RTL6	Q6ICC9	239 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	ULK3	Q6PHR2	472 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	B3GNT6	Q6ZMB0	384 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	CCDC121	Q6ZUS5	278 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	CHMP1B	Q7LBR1	199 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	ATG4D	Q86TL0	474 aa	Predicted RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	LACC1	Q8IV20	430 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	UBQLNL	Q8IYU4	475 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	OR2V1	Q8NHB1	315 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	GEMIN6	Q8WXD5	167 aa	Known RBP	11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	SLC38A4	Q969I6	547 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	ASB9	Q96DX5	294 aa		11.09	□□□□□ -0.63
PKN1-208	ENST00000586900	SLC47A1	Q96FL8	570 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms